Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-5A0A0G2JFX6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav7-5A0A0G2JFX6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-5A0A0G2JFX6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-5A0A0G2JFX6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-5A0A0G2JFX6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-5A0A0G2JFX6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-5A0A0G2JFX6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav7-5A0A0G2JFX6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-5A0A0G2JFX6 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-5A0A0G2JFX6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-5A0A0G2JFX6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-5A0A0G2JFX6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-5A0A0G2JFX6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-5A0A0G2JFX6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav7-5A0A0G2JFX6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-5A0A0G2JFX6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-5A0A0G2JFX6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-5A0A0G2JFX6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav7-5A0A0G2JFX6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-5A0A0G2JFX6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-5A0A0G2JFX6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav7-5A0A0G2JFX6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-5A0A0G2JFX6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-5A0A0G2JFX6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Trav7-5A0A0G2JFX6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-5A0A0G2JFX6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-5A0A0G2JFX6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-5A0A0G2JFX6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-5A0A0G2JFX6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-5A0A0G2JFX6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-5A0A0G2JFX6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav7-5A0A0G2JFX6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-5A0A0G2JFX6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav7-5A0A0G2JFX6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-5A0A0G2JFX6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Trav7-5A0A0G2JFX6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav7-5A0A0G2JFX6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav7-5A0A0G2JFX6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav7-5A0A0G2JFX6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav7-5A0A0G2JFX6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7-5A0A0G2JFX6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav7-5A0A0G2JFX6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav7-5A0A0G2JFX6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7-5A0A0G2JFX6 Gm6211-202ENSMUST00000167849 925 ntBASIC14.33□□□□□ -0.12
Trav7-5A0A0G2JFX6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav7-5A0A0G2JFX6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7-5A0A0G2JFX6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav7-5A0A0G2JFX6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7-5A0A0G2JFX6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7-5A0A0G2JFX6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Trav7-5A0A0G2JFX6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7-5A0A0G2JFX6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7-5A0A0G2JFX6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav7-5A0A0G2JFX6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7-5A0A0G2JFX6 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.32□□□□□ -0.12
Trav7-5A0A0G2JFX6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7-5A0A0G2JFX6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7-5A0A0G2JFX6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7-5A0A0G2JFX6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7-5A0A0G2JFX6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7-5A0A0G2JFX6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav7-5A0A0G2JFX6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7-5A0A0G2JFX6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7-5A0A0G2JFX6 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.32□□□□□ -0.12
Trav7-5A0A0G2JFX6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav7-5A0A0G2JFX6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.32□□□□□ -0.12
Trav7-5A0A0G2JFX6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav7-5A0A0G2JFX6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms