Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Gm4968-201ENSMUST00000071458 858 ntBASIC13.21□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Rarb-207ENSMUST00000225921 2756 ntBASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-1A0A0G2JEU8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.19□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trav13n-1A0A0G2JEU8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-1A0A0G2JEU8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-1A0A0G2JEU8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms