Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav21-dv12A0A075B6C4 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.06□□□□□ -0.16
Trav21-dv12A0A075B6C4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav21-dv12A0A075B6C4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav21-dv12A0A075B6C4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav21-dv12A0A075B6C4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav21-dv12A0A075B6C4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav21-dv12A0A075B6C4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav21-dv12A0A075B6C4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Trav21-dv12A0A075B6C4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav21-dv12A0A075B6C4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav21-dv12A0A075B6C4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav21-dv12A0A075B6C4 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.05□□□□□ -0.16
Trav21-dv12A0A075B6C4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Trav21-dv12A0A075B6C4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav21-dv12A0A075B6C4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav21-dv12A0A075B6C4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav21-dv12A0A075B6C4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav21-dv12A0A075B6C4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav21-dv12A0A075B6C4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav21-dv12A0A075B6C4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav21-dv12A0A075B6C4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav21-dv12A0A075B6C4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav21-dv12A0A075B6C4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav21-dv12A0A075B6C4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav21-dv12A0A075B6C4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav21-dv12A0A075B6C4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav21-dv12A0A075B6C4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav21-dv12A0A075B6C4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav21-dv12A0A075B6C4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav21-dv12A0A075B6C4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav21-dv12A0A075B6C4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav21-dv12A0A075B6C4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav21-dv12A0A075B6C4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav21-dv12A0A075B6C4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Trav21-dv12A0A075B6C4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav21-dv12A0A075B6C4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav21-dv12A0A075B6C4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav21-dv12A0A075B6C4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav21-dv12A0A075B6C4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav21-dv12A0A075B6C4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav21-dv12A0A075B6C4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav21-dv12A0A075B6C4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav21-dv12A0A075B6C4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav21-dv12A0A075B6C4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Trav21-dv12A0A075B6C4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav21-dv12A0A075B6C4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav21-dv12A0A075B6C4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Trav21-dv12A0A075B6C4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav21-dv12A0A075B6C4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav21-dv12A0A075B6C4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav21-dv12A0A075B6C4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav21-dv12A0A075B6C4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav21-dv12A0A075B6C4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav21-dv12A0A075B6C4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav21-dv12A0A075B6C4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav21-dv12A0A075B6C4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav21-dv12A0A075B6C4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav21-dv12A0A075B6C4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.02□□□□□ -0.17
Trav21-dv12A0A075B6C4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav21-dv12A0A075B6C4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav21-dv12A0A075B6C4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav21-dv12A0A075B6C4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav21-dv12A0A075B6C4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav21-dv12A0A075B6C4 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav21-dv12A0A075B6C4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav21-dv12A0A075B6C4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trav21-dv12A0A075B6C4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav21-dv12A0A075B6C4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.01□□□□□ -0.17
Trav21-dv12A0A075B6C4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav21-dv12A0A075B6C4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav21-dv12A0A075B6C4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav21-dv12A0A075B6C4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav21-dv12A0A075B6C4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav21-dv12A0A075B6C4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav21-dv12A0A075B6C4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav21-dv12A0A075B6C4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.01□□□□□ -0.17
Trav21-dv12A0A075B6C4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms