Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-3A0A075B695 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav9d-3A0A075B695 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-3A0A075B695 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-3A0A075B695 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav9d-3A0A075B695 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav9d-3A0A075B695 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-3A0A075B695 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-3A0A075B695 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.04□□□□□ -0.32
Trav9d-3A0A075B695 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-3A0A075B695 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-3A0A075B695 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-3A0A075B695 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav9d-3A0A075B695 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Trav9d-3A0A075B695 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav9d-3A0A075B695 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-3A0A075B695 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav9d-3A0A075B695 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-3A0A075B695 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-3A0A075B695 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-3A0A075B695 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-3A0A075B695 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav9d-3A0A075B695 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav9d-3A0A075B695 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-3A0A075B695 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-3A0A075B695 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-3A0A075B695 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-3A0A075B695 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-3A0A075B695 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-3A0A075B695 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-3A0A075B695 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-3A0A075B695 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-3A0A075B695 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-3A0A075B695 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.03□□□□□ -0.32
Trav9d-3A0A075B695 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav9d-3A0A075B695 Gm10493-201ENSMUST00000097270 612 ntBASIC13.03□□□□□ -0.32
Trav9d-3A0A075B695 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav9d-3A0A075B695 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-3A0A075B695 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-3A0A075B695 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav9d-3A0A075B695 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-3A0A075B695 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-3A0A075B695 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trav9d-3A0A075B695 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9d-3A0A075B695 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9d-3A0A075B695 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9d-3A0A075B695 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9d-3A0A075B695 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
Trav9d-3A0A075B695 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-3A0A075B695 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav9d-3A0A075B695 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-3A0A075B695 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav9d-3A0A075B695 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-3A0A075B695 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.02□□□□□ -0.33
Trav9d-3A0A075B695 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav9d-3A0A075B695 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-3A0A075B695 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-3A0A075B695 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-3A0A075B695 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-3A0A075B695 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms