Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav18A0A075B656 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav18A0A075B656 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav18A0A075B656 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav18A0A075B656 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.98□□□□□ -0.01
Trav18A0A075B656 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.98□□□□□ -0.01
Trav18A0A075B656 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trav18A0A075B656 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav18A0A075B656 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.98□□□□□ -0.01
Trav18A0A075B656 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav18A0A075B656 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav18A0A075B656 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav18A0A075B656 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav18A0A075B656 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav18A0A075B656 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav18A0A075B656 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav18A0A075B656 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav18A0A075B656 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav18A0A075B656 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Trav18A0A075B656 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav18A0A075B656 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav18A0A075B656 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav18A0A075B656 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav18A0A075B656 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav18A0A075B656 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.97□□□□□ -0.01
Trav18A0A075B656 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav18A0A075B656 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav18A0A075B656 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav18A0A075B656 Reep4-203ENSMUST00000226563 1444 ntBASIC14.97□□□□□ -0.01
Trav18A0A075B656 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav18A0A075B656 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav18A0A075B656 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav18A0A075B656 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav18A0A075B656 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav18A0A075B656 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav18A0A075B656 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.96□□□□□ -0.01
Trav18A0A075B656 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.96□□□□□ -0.01
Trav18A0A075B656 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Trav18A0A075B656 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.96□□□□□ -0.01
Trav18A0A075B656 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav18A0A075B656 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Trav18A0A075B656 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav18A0A075B656 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav18A0A075B656 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav18A0A075B656 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav18A0A075B656 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav18A0A075B656 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Trav18A0A075B656 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav18A0A075B656 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav18A0A075B656 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav18A0A075B656 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav18A0A075B656 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.95□□□□□ -0.02
Trav18A0A075B656 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav18A0A075B656 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.95□□□□□ -0.02
Trav18A0A075B656 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.95□□□□□ -0.02
Trav18A0A075B656 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav18A0A075B656 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav18A0A075B656 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav18A0A075B656 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav18A0A075B656 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav18A0A075B656 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Trav18A0A075B656 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav18A0A075B656 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Trav18A0A075B656 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav18A0A075B656 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav18A0A075B656 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav18A0A075B656 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav18A0A075B656 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav18A0A075B656 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav18A0A075B656 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav18A0A075B656 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav18A0A075B656 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav18A0A075B656 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Trav18A0A075B656 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.94□□□□□ -0.02
Trav18A0A075B656 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav18A0A075B656 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav18A0A075B656 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav18A0A075B656 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav18A0A075B656 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav18A0A075B656 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav18A0A075B656 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav18A0A075B656 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav18A0A075B656 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.93□□□□□ -0.02
Trav18A0A075B656 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav18A0A075B656 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav18A0A075B656 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trav18A0A075B656 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav18A0A075B656 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav18A0A075B656 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav18A0A075B656 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.93□□□□□ -0.02
Trav18A0A075B656 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.93□□□□□ -0.02
Trav18A0A075B656 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav18A0A075B656 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav18A0A075B656 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
Trav18A0A075B656 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav18A0A075B656 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav18A0A075B656 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav18A0A075B656 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav18A0A075B656 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trav18A0A075B656 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms