Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav17A0A075B655 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav17A0A075B655 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav17A0A075B655 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav17A0A075B655 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav17A0A075B655 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.52□□□□□ -0.09
Trav17A0A075B655 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav17A0A075B655 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav17A0A075B655 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav17A0A075B655 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav17A0A075B655 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav17A0A075B655 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav17A0A075B655 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav17A0A075B655 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav17A0A075B655 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav17A0A075B655 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav17A0A075B655 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav17A0A075B655 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav17A0A075B655 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav17A0A075B655 Gm12251-201ENSMUST00000117893 792 ntBASIC14.51□□□□□ -0.09
Trav17A0A075B655 Gm27801-201ENSMUST00000184174 223 ntBASIC14.51□□□□□ -0.09
Trav17A0A075B655 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav17A0A075B655 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav17A0A075B655 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav17A0A075B655 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav17A0A075B655 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav17A0A075B655 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav17A0A075B655 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav17A0A075B655 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Trav17A0A075B655 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav17A0A075B655 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.5□□□□□ -0.09
Trav17A0A075B655 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav17A0A075B655 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav17A0A075B655 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav17A0A075B655 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav17A0A075B655 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav17A0A075B655 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav17A0A075B655 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav17A0A075B655 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav17A0A075B655 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav17A0A075B655 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14.5□□□□□ -0.09
Trav17A0A075B655 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.5□□□□□ -0.09
Trav17A0A075B655 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav17A0A075B655 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav17A0A075B655 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav17A0A075B655 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav17A0A075B655 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav17A0A075B655 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav17A0A075B655 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav17A0A075B655 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav17A0A075B655 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav17A0A075B655 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.49□□□□□ -0.09
Trav17A0A075B655 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.49□□□□□ -0.09
Trav17A0A075B655 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.49□□□□□ -0.09
Trav17A0A075B655 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.49□□□□□ -0.09
Trav17A0A075B655 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav17A0A075B655 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav17A0A075B655 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav17A0A075B655 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav17A0A075B655 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav17A0A075B655 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav17A0A075B655 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav17A0A075B655 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav17A0A075B655 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav17A0A075B655 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav17A0A075B655 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav17A0A075B655 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.48□□□□□ -0.09
Trav17A0A075B655 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.48□□□□□ -0.09
Trav17A0A075B655 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.48□□□□□ -0.09
Trav17A0A075B655 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav17A0A075B655 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav17A0A075B655 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav17A0A075B655 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav17A0A075B655 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav17A0A075B655 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav17A0A075B655 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav17A0A075B655 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms