Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav16A0A075B653 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav16A0A075B653 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16A0A075B653 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav16A0A075B653 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16A0A075B653 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav16A0A075B653 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16A0A075B653 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16A0A075B653 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.11□□□□□ -0.15
Trav16A0A075B653 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav16A0A075B653 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav16A0A075B653 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16A0A075B653 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav16A0A075B653 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16A0A075B653 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16A0A075B653 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16A0A075B653 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16A0A075B653 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16A0A075B653 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav16A0A075B653 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16A0A075B653 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.1□□□□□ -0.15
Trav16A0A075B653 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16A0A075B653 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16A0A075B653 Gm15546-201ENSMUST00000122095 826 ntBASIC14.1□□□□□ -0.15
Trav16A0A075B653 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16A0A075B653 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16A0A075B653 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16A0A075B653 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16A0A075B653 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16A0A075B653 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16A0A075B653 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16A0A075B653 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Trav16A0A075B653 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.1□□□□□ -0.15
Trav16A0A075B653 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav16A0A075B653 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16A0A075B653 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16A0A075B653 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16A0A075B653 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16A0A075B653 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16A0A075B653 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav16A0A075B653 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16A0A075B653 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16A0A075B653 Gm5812-201ENSMUST00000061073 957 ntBASIC14.09□□□□□ -0.15
Trav16A0A075B653 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16A0A075B653 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16A0A075B653 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16A0A075B653 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16A0A075B653 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.09□□□□□ -0.15
Trav16A0A075B653 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav16A0A075B653 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16A0A075B653 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16A0A075B653 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16A0A075B653 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav16A0A075B653 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav16A0A075B653 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Trav16A0A075B653 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.15
Trav16A0A075B653 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav16A0A075B653 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trav16A0A075B653 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav16A0A075B653 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16A0A075B653 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav16A0A075B653 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16A0A075B653 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16A0A075B653 Gm9959-201ENSMUST00000068277 390 ntBASIC14.08□□□□□ -0.16
Trav16A0A075B653 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav16A0A075B653 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16A0A075B653 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16A0A075B653 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16A0A075B653 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16A0A075B653 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16A0A075B653 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16A0A075B653 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16A0A075B653 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16A0A075B653 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav16A0A075B653 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.07□□□□□ -0.16
Trav16A0A075B653 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav16A0A075B653 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms