Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav8n-2A0A075B633 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.77■□□□□ 0.27
Trav8n-2A0A075B633 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav8n-2A0A075B633 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav8n-2A0A075B633 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav8n-2A0A075B633 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8n-2A0A075B633 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8n-2A0A075B633 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8n-2A0A075B633 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8n-2A0A075B633 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav8n-2A0A075B633 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trav8n-2A0A075B633 Gm37292-201ENSMUST00000192062 758 ntBASIC16.76■□□□□ 0.27
Trav8n-2A0A075B633 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8n-2A0A075B633 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8n-2A0A075B633 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Trav8n-2A0A075B633 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8n-2A0A075B633 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8n-2A0A075B633 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8n-2A0A075B633 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8n-2A0A075B633 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav8n-2A0A075B633 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8n-2A0A075B633 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8n-2A0A075B633 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8n-2A0A075B633 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav8n-2A0A075B633 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trav8n-2A0A075B633 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8n-2A0A075B633 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.75■□□□□ 0.27
Trav8n-2A0A075B633 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8n-2A0A075B633 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8n-2A0A075B633 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.75■□□□□ 0.27
Trav8n-2A0A075B633 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav8n-2A0A075B633 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8n-2A0A075B633 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav8n-2A0A075B633 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav8n-2A0A075B633 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav8n-2A0A075B633 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav8n-2A0A075B633 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8n-2A0A075B633 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8n-2A0A075B633 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav8n-2A0A075B633 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8n-2A0A075B633 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.74■□□□□ 0.27
Trav8n-2A0A075B633 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8n-2A0A075B633 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8n-2A0A075B633 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trav8n-2A0A075B633 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav8n-2A0A075B633 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8n-2A0A075B633 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8n-2A0A075B633 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8n-2A0A075B633 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav8n-2A0A075B633 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav8n-2A0A075B633 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Trav8n-2A0A075B633 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Trav8n-2A0A075B633 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8n-2A0A075B633 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trav8n-2A0A075B633 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav8n-2A0A075B633 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8n-2A0A075B633 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8n-2A0A075B633 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8n-2A0A075B633 Gm13559-201ENSMUST00000120476 863 ntBASIC16.73■□□□□ 0.27
Trav8n-2A0A075B633 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Trav8n-2A0A075B633 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.73■□□□□ 0.27
Trav8n-2A0A075B633 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8n-2A0A075B633 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8n-2A0A075B633 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8n-2A0A075B633 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8n-2A0A075B633 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8n-2A0A075B633 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8n-2A0A075B633 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav8n-2A0A075B633 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav8n-2A0A075B633 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.73■□□□□ 0.27
Trav8n-2A0A075B633 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav8n-2A0A075B633 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav8n-2A0A075B633 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav8n-2A0A075B633 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav8n-2A0A075B633 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav8n-2A0A075B633 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav8n-2A0A075B633 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Trav8n-2A0A075B633 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.72■□□□□ 0.27
Trav8n-2A0A075B633 Gm11539-201ENSMUST00000119837 557 ntBASIC16.72■□□□□ 0.27
Trav8n-2A0A075B633 Gm13436-201ENSMUST00000120418 567 ntBASIC16.72■□□□□ 0.27
Trav8n-2A0A075B633 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav8n-2A0A075B633 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.72■□□□□ 0.27
Trav8n-2A0A075B633 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav8n-2A0A075B633 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav8n-2A0A075B633 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Trav8n-2A0A075B633 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav8n-2A0A075B633 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav8n-2A0A075B633 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav8n-2A0A075B633 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8n-2A0A075B633 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8n-2A0A075B633 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trav8n-2A0A075B633 Gm3375-201ENSMUST00000203929 796 ntBASIC16.71■□□□□ 0.27
Trav8n-2A0A075B633 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav8n-2A0A075B633 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8n-2A0A075B633 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8n-2A0A075B633 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8n-2A0A075B633 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav8n-2A0A075B633 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Trav8n-2A0A075B633 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav8n-2A0A075B633 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms