Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4n-4A0A075B615 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
Trav4n-4A0A075B615 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4n-4A0A075B615 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav4n-4A0A075B615 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4n-4A0A075B615 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4n-4A0A075B615 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4n-4A0A075B615 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4n-4A0A075B615 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4n-4A0A075B615 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4n-4A0A075B615 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4n-4A0A075B615 Gm16464-201ENSMUST00000117815 1095 ntBASIC12.71□□□□□ -0.37
Trav4n-4A0A075B615 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav4n-4A0A075B615 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.71□□□□□ -0.37
Trav4n-4A0A075B615 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav4n-4A0A075B615 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4n-4A0A075B615 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav4n-4A0A075B615 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trav4n-4A0A075B615 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4n-4A0A075B615 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4n-4A0A075B615 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4n-4A0A075B615 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4n-4A0A075B615 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Trav4n-4A0A075B615 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4n-4A0A075B615 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4n-4A0A075B615 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav4n-4A0A075B615 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4n-4A0A075B615 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4n-4A0A075B615 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4n-4A0A075B615 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4n-4A0A075B615 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4n-4A0A075B615 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav4n-4A0A075B615 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav4n-4A0A075B615 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav4n-4A0A075B615 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4n-4A0A075B615 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4n-4A0A075B615 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav4n-4A0A075B615 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4n-4A0A075B615 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trav4n-4A0A075B615 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4n-4A0A075B615 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4n-4A0A075B615 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav4n-4A0A075B615 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trav4n-4A0A075B615 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4n-4A0A075B615 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4n-4A0A075B615 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4n-4A0A075B615 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4n-4A0A075B615 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4n-4A0A075B615 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4n-4A0A075B615 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4n-4A0A075B615 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4n-4A0A075B615 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4n-4A0A075B615 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4n-4A0A075B615 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4n-4A0A075B615 Haglr-201ENSMUST00000100000 2085 ntBASIC12.69□□□□□ -0.38
Trav4n-4A0A075B615 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4n-4A0A075B615 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4n-4A0A075B615 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4n-4A0A075B615 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Trav4n-4A0A075B615 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4n-4A0A075B615 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4n-4A0A075B615 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav4n-4A0A075B615 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 Gm14523-201ENSMUST00000117260 558 ntBASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav4n-4A0A075B615 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4n-4A0A075B615 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.67□□□□□ -0.38
Trav4n-4A0A075B615 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4n-4A0A075B615 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4n-4A0A075B615 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4n-4A0A075B615 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4n-4A0A075B615 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4n-4A0A075B615 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4n-4A0A075B615 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trav4n-4A0A075B615 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav4n-4A0A075B615 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC12.67□□□□□ -0.38
Trav4n-4A0A075B615 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4n-4A0A075B615 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4n-4A0A075B615 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.67□□□□□ -0.38
Trav4n-4A0A075B615 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms