Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav9-1A0A075B601 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9-1A0A075B601 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9-1A0A075B601 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9-1A0A075B601 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9-1A0A075B601 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav9-1A0A075B601 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9-1A0A075B601 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9-1A0A075B601 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9-1A0A075B601 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9-1A0A075B601 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.27□□□□□ -0.13
Trav9-1A0A075B601 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.27□□□□□ -0.13
Trav9-1A0A075B601 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9-1A0A075B601 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9-1A0A075B601 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.27□□□□□ -0.13
Trav9-1A0A075B601 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9-1A0A075B601 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9-1A0A075B601 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9-1A0A075B601 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9-1A0A075B601 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav9-1A0A075B601 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.26□□□□□ -0.13
Trav9-1A0A075B601 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.26□□□□□ -0.13
Trav9-1A0A075B601 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Trav9-1A0A075B601 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.26□□□□□ -0.13
Trav9-1A0A075B601 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9-1A0A075B601 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9-1A0A075B601 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.26□□□□□ -0.13
Trav9-1A0A075B601 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9-1A0A075B601 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9-1A0A075B601 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9-1A0A075B601 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9-1A0A075B601 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9-1A0A075B601 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9-1A0A075B601 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9-1A0A075B601 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9-1A0A075B601 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9-1A0A075B601 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9-1A0A075B601 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9-1A0A075B601 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9-1A0A075B601 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9-1A0A075B601 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav9-1A0A075B601 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9-1A0A075B601 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav9-1A0A075B601 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9-1A0A075B601 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9-1A0A075B601 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9-1A0A075B601 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9-1A0A075B601 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9-1A0A075B601 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9-1A0A075B601 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9-1A0A075B601 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9-1A0A075B601 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9-1A0A075B601 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9-1A0A075B601 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9-1A0A075B601 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9-1A0A075B601 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9-1A0A075B601 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9-1A0A075B601 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9-1A0A075B601 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9-1A0A075B601 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.23□□□□□ -0.13
Trav9-1A0A075B601 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9-1A0A075B601 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9-1A0A075B601 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9-1A0A075B601 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9-1A0A075B601 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Trav9-1A0A075B601 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9-1A0A075B601 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms