Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.69□□□□□ -0.06
Trav6-1A0A075B5Z8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-1A0A075B5Z8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-1A0A075B5Z8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-1A0A075B5Z8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-1A0A075B5Z8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav6-1A0A075B5Z8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-1A0A075B5Z8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-1A0A075B5Z8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-1A0A075B5Z8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.69□□□□□ -0.06
Trav6-1A0A075B5Z8 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.69□□□□□ -0.06
Trav6-1A0A075B5Z8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-1A0A075B5Z8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-1A0A075B5Z8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Gm38205-201ENSMUST00000192243 258 ntBASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-1A0A075B5Z8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
Trav6-1A0A075B5Z8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav6-1A0A075B5Z8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-1A0A075B5Z8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-1A0A075B5Z8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-1A0A075B5Z8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-1A0A075B5Z8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav6-1A0A075B5Z8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav6-1A0A075B5Z8 Gm8493-201ENSMUST00000196881 489 ntBASIC14.66□□□□□ -0.06
Trav6-1A0A075B5Z8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-1A0A075B5Z8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-1A0A075B5Z8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-1A0A075B5Z8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-1A0A075B5Z8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-1A0A075B5Z8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-1A0A075B5Z8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-1A0A075B5Z8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-1A0A075B5Z8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav6-1A0A075B5Z8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav6-1A0A075B5Z8 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.65□□□□□ -0.06
Trav6-1A0A075B5Z8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Trav6-1A0A075B5Z8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-1A0A075B5Z8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Trav6-1A0A075B5Z8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-1A0A075B5Z8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav6-1A0A075B5Z8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-1A0A075B5Z8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-1A0A075B5Z8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-1A0A075B5Z8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-1A0A075B5Z8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-1A0A075B5Z8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.65□□□□□ -0.06
Trav6-1A0A075B5Z8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Trav6-1A0A075B5Z8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-1A0A075B5Z8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-1A0A075B5Z8 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.64□□□□□ -0.07
Trav6-1A0A075B5Z8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6-1A0A075B5Z8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms