Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv4A0A075B5I2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.32■□□□□ 0.52
Trbv4A0A075B5I2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.32■□□□□ 0.52
Trbv4A0A075B5I2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv4A0A075B5I2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv4A0A075B5I2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv4A0A075B5I2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv4A0A075B5I2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trbv4A0A075B5I2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv4A0A075B5I2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv4A0A075B5I2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv4A0A075B5I2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv4A0A075B5I2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Trbv4A0A075B5I2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv4A0A075B5I2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv4A0A075B5I2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv4A0A075B5I2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv4A0A075B5I2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv4A0A075B5I2 Gm6365-201ENSMUST00000054711 744 ntBASIC18.31■□□□□ 0.52
Trbv4A0A075B5I2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trbv4A0A075B5I2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trbv4A0A075B5I2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv4A0A075B5I2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Trbv4A0A075B5I2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trbv4A0A075B5I2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv4A0A075B5I2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv4A0A075B5I2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv4A0A075B5I2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv4A0A075B5I2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv4A0A075B5I2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv4A0A075B5I2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv4A0A075B5I2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv4A0A075B5I2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv4A0A075B5I2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.3■□□□□ 0.52
Trbv4A0A075B5I2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv4A0A075B5I2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv4A0A075B5I2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.3■□□□□ 0.52
Trbv4A0A075B5I2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv4A0A075B5I2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv4A0A075B5I2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv4A0A075B5I2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trbv4A0A075B5I2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv4A0A075B5I2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv4A0A075B5I2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv4A0A075B5I2 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.29■□□□□ 0.52
Trbv4A0A075B5I2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.29■□□□□ 0.52
Trbv4A0A075B5I2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv4A0A075B5I2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv4A0A075B5I2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.29■□□□□ 0.52
Trbv4A0A075B5I2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv4A0A075B5I2 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.29■□□□□ 0.52
Trbv4A0A075B5I2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trbv4A0A075B5I2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.29■□□□□ 0.52
Trbv4A0A075B5I2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv4A0A075B5I2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv4A0A075B5I2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv4A0A075B5I2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trbv4A0A075B5I2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv4A0A075B5I2 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.29■□□□□ 0.52
Trbv4A0A075B5I2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Rarb-207ENSMUST00000225921 2756 ntBASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv4A0A075B5I2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv4A0A075B5I2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv4A0A075B5I2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.27■□□□□ 0.52
Trbv4A0A075B5I2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv4A0A075B5I2 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.27■□□□□ 0.52
Trbv4A0A075B5I2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv4A0A075B5I2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv4A0A075B5I2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv4A0A075B5I2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv4A0A075B5I2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv4A0A075B5I2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Trbv4A0A075B5I2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv4A0A075B5I2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trbv4A0A075B5I2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv4A0A075B5I2 Gm7290-201ENSMUST00000104990 617 ntBASIC18.26■□□□□ 0.51
Trbv4A0A075B5I2 Gm12918-201ENSMUST00000120234 636 ntBASIC18.26■□□□□ 0.51
Trbv4A0A075B5I2 Gm15710-201ENSMUST00000121821 636 ntBASIC18.26■□□□□ 0.51
Trbv4A0A075B5I2 Gm5075-201ENSMUST00000196916 622 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms