Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm26417-201ENSMUST00000104274 135 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm13423-201ENSMUST00000117205 888 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm14893-201ENSMUST00000117904 282 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm9439-201ENSMUST00000119554 973 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm11338-201ENSMUST00000120086 1160 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm6067-201ENSMUST00000121648 491 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm11434-201ENSMUST00000122379 629 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm16284-201ENSMUST00000140995 400 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm25640-201ENSMUST00000175378 125 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm26528-201ENSMUST00000181965 283 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Mir6241-201ENSMUST00000184225 103 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm10416-201ENSMUST00000197379 645 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm8924-201ENSMUST00000197405 1132 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm4525-201ENSMUST00000198831 254 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 AC187103.4-201ENSMUST00000225399 300 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 AC135292.2-201ENSMUST00000227559 367 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Gm43526-201ENSMUST00000196666 1565 ntBASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Gm37107-201ENSMUST00000195326 2552 ntBASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Gm26419-201ENSMUST00000104272 133 ntBASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Gm25379-201ENSMUST00000104338 114 ntBASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Gm13196-201ENSMUST00000118297 379 ntBASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Gm14869-201ENSMUST00000119007 884 ntBASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Gm16113-201ENSMUST00000159629 372 ntBASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Gm30517-201ENSMUST00000197350 772 ntBASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Gm6681-201ENSMUST00000205215 607 ntBASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Gm18655-201ENSMUST00000214802 1090 ntBASIC6.44□□□□□ -1.38
Trim3Q9R1R2 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 AC161374.1-201ENSMUST00000224191 794 ntBASIC6.44□□□□□ -1.38
Trim3Q9R1R2 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Gm6887-201ENSMUST00000080945 482 ntBASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Gm23734-201ENSMUST00000083753 109 ntBASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim3Q9R1R2 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Mbnl2-203ENSMUST00000226800 3328 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm24869-201ENSMUST00000104072 128 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm26416-201ENSMUST00000104280 134 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms