Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim39Q9ESN2 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
Trim39Q9ESN2 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Trim39Q9ESN2 Tmem177-201ENSMUST00000037906 3341 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim39Q9ESN2 Gm28791-201ENSMUST00000185888 1779 ntBASIC7.38□□□□□ -1.23
Trim39Q9ESN2 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
Trim39Q9ESN2 Gm45237-202ENSMUST00000211157 2452 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim39Q9ESN2 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim39Q9ESN2 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim39Q9ESN2 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim39Q9ESN2 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim39Q9ESN2 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm37283-201ENSMUST00000193111 1571 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm8107-201ENSMUST00000117477 2009 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm17027-201ENSMUST00000171202 1403 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm37080-201ENSMUST00000194804 2404 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Entpd3-201ENSMUST00000047687 3453 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 AC166574.1-201ENSMUST00000226916 1309 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm37278-201ENSMUST00000191619 2872 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm12044-201ENSMUST00000120335 213 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm11676-201ENSMUST00000120443 490 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm11933-201ENSMUST00000121550 375 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm12770-201ENSMUST00000121734 462 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm12754-201ENSMUST00000121908 454 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Fam229b-203ENSMUST00000125042 707 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Rpl21-ps8-201ENSMUST00000130005 478 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Cul1-203ENSMUST00000143941 530 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm13872-203ENSMUST00000147082 657 ntTSL 3 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 4930519F09Rik-202ENSMUST00000163084 1111 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm25442-201ENSMUST00000177270 92 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Hcfc1r1-202ENSMUST00000179928 597 ntAPPRIS ALT2 TSL 3 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm29577-201ENSMUST00000186427 693 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm20954-201ENSMUST00000189078 644 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm37450-201ENSMUST00000195218 170 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm40040-201ENSMUST00000196123 504 ntTSL 3 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm42818-201ENSMUST00000198869 987 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Igkv8-22-201ENSMUST00000199501 367 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Zc2hc1b-201ENSMUST00000019954 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm44227-201ENSMUST00000203576 241 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Gm45834-201ENSMUST00000212445 454 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 1700066J03Rik-202ENSMUST00000224280 516 ntBASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim39Q9ESN2 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms