Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Ube3bQ9ES34 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ube3bQ9ES34 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Ube3bQ9ES34 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ube3bQ9ES34 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Ube3bQ9ES34 Gm45512-201ENSMUST00000210432 1553 ntBASIC9.19□□□□□ -0.94
Ube3bQ9ES34 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ube3bQ9ES34 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Ube3bQ9ES34 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC9.19□□□□□ -0.94
Ube3bQ9ES34 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Ube3bQ9ES34 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Gm11322-201ENSMUST00000118095 435 ntBASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC9.18□□□□□ -0.94
Ube3bQ9ES34 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Gm25780-201ENSMUST00000122528 253 ntBASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Gm23467-201ENSMUST00000157127 159 ntBASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Gm23007-201ENSMUST00000158951 177 ntBASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Gm27866-201ENSMUST00000184459 171 ntBASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Gm29435-201ENSMUST00000191310 689 ntBASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Gm37770-201ENSMUST00000192855 772 ntBASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Gm43062-201ENSMUST00000196302 1319 ntBASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Gm42938-201ENSMUST00000198414 1072 ntBASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Gm43776-201ENSMUST00000199729 2914 ntBASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Gm45693-201ENSMUST00000211391 1157 ntBASIC9.18□□□□□ -0.94
Ube3bQ9ES34 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 AC102582.1-201ENSMUST00000215376 378 ntBASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 AC121844.1-201ENSMUST00000218706 137 ntBASIC9.18□□□□□ -0.94
Ube3bQ9ES34 AC154904.1-201ENSMUST00000219510 312 ntBASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 AC154329.2-201ENSMUST00000225257 383 ntBASIC9.18□□□□□ -0.94
Ube3bQ9ES34 AC152940.1-201ENSMUST00000226504 139 ntBASIC9.18□□□□□ -0.94
Ube3bQ9ES34 AC160930.1-201ENSMUST00000227194 337 ntBASIC9.18□□□□□ -0.94
Ube3bQ9ES34 AC139209.2-201ENSMUST00000227680 1208 ntBASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Ube3bQ9ES34 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm28593-201ENSMUST00000190989 2170 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm18908-201ENSMUST00000207125 1483 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm11282-201ENSMUST00000119018 1416 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm6327-201ENSMUST00000171185 1335 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm38043-201ENSMUST00000195501 5141 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm24986-201ENSMUST00000104452 132 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm23323-201ENSMUST00000104471 133 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm7129-201ENSMUST00000117402 997 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm6654-201ENSMUST00000118950 348 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm12959-201ENSMUST00000119396 403 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm5406-201ENSMUST00000120054 766 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm13622-201ENSMUST00000120658 433 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm14366-201ENSMUST00000121970 730 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm14457-201ENSMUST00000148069 1161 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm22080-201ENSMUST00000157591 106 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm23027-201ENSMUST00000158771 158 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Atp2b4-208ENSMUST00000167348 243 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm26652-202ENSMUST00000181672 475 ntBASIC9.17□□□□□ -0.94
Ube3bQ9ES34 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ube3bQ9ES34 Gm43007-201ENSMUST00000197618 291 ntBASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms