Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.62□□□□□ -1.35
Lima1Q9ERG0 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Gm22707-201ENSMUST00000103834 110 ntBASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Gm17184-201ENSMUST00000111864 462 ntBASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Gm13798-201ENSMUST00000118285 139 ntBASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Gm14584-201ENSMUST00000118956 637 ntBASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Gm13486-201ENSMUST00000119910 282 ntBASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Gm17217-201ENSMUST00000166613 469 ntBASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Gm4956-202ENSMUST00000178869 672 ntBASIC6.62□□□□□ -1.35
Lima1Q9ERG0 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Gm27026-201ENSMUST00000183003 892 ntBASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Gm26413-201ENSMUST00000196783 126 ntBASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Gm8539-201ENSMUST00000199822 501 ntBASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Olfr923-204ENSMUST00000219798 1068 ntBASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Gm4796-201ENSMUST00000219802 624 ntBASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 AC131029.2-203ENSMUST00000228116 1244 ntBASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 n-R5s29-201ENSMUST00000082836 119 ntBASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Mbnl2-203ENSMUST00000226800 3328 ntBASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Gm10388-201ENSMUST00000205001 2936 ntBASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Lima1Q9ERG0 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm18908-201ENSMUST00000207125 1483 ntBASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm11263-201ENSMUST00000121853 749 ntBASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm4887-201ENSMUST00000122230 1053 ntBASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm23392-201ENSMUST00000157580 113 ntBASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm24735-201ENSMUST00000158859 118 ntBASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm7420-201ENSMUST00000162836 842 ntBASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm7244-201ENSMUST00000164658 455 ntBASIC6.61□□□□□ -1.35
Lima1Q9ERG0 Gm4308-201ENSMUST00000179735 914 ntBASIC6.61□□□□□ -1.35
Lima1Q9ERG0 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 126.6 ms