Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm29382-201ENSMUST00000189549 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm29377-205ENSMUST00000189603 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28327-201ENSMUST00000189638 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28790-201ENSMUST00000189642 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28907-201ENSMUST00000189700 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm29586-207ENSMUST00000189745 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm29115-201ENSMUST00000189870 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28366-201ENSMUST00000190147 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm29212-201ENSMUST00000190384 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm29533-201ENSMUST00000190403 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28162-201ENSMUST00000190545 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm29030-201ENSMUST00000190848 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28742-201ENSMUST00000191001 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28899-201ENSMUST00000191161 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm29567-201ENSMUST00000191188 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28222-201ENSMUST00000191210 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28776-201ENSMUST00000191282 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm29306-201ENSMUST00000191366 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm29618-201ENSMUST00000191423 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28136-210ENSMUST00000191432 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm29251-201ENSMUST00000191480 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28658-201ENSMUST00000191532 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm32180-201ENSMUST00000192415 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm30598-201ENSMUST00000192620 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm37627-201ENSMUST00000194585 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm34274-201ENSMUST00000195825 615 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm2860-201ENSMUST00000199226 707 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 AC127242.3-201ENSMUST00000222009 580 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 AC165157.1-201ENSMUST00000222981 580 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 AC187103.4-201ENSMUST00000225399 300 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 AC154380.1-201ENSMUST00000226804 720 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 AC138765.3-201ENSMUST00000227981 423 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 AC137950.3-201ENSMUST00000228250 246 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 AC154618.2-201ENSMUST00000228299 452 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Tcf24-201ENSMUST00000097824 2639 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm43876-201ENSMUST00000203831 3229 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm43285-201ENSMUST00000196563 3592 ntBASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Nup88Q8CEC0 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Gm22774-201ENSMUST00000102084 109 ntBASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Gm12653-201ENSMUST00000117778 561 ntBASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Gm11893-201ENSMUST00000117829 491 ntBASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Gm15616-201ENSMUST00000118662 375 ntBASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Gm5809-201ENSMUST00000121854 529 ntBASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Gm24057-201ENSMUST00000158616 302 ntBASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Gm8924-201ENSMUST00000197405 1132 ntBASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 AL713985.1-201ENSMUST00000219030 420 ntBASIC8.01□□□□□ -1.13
Nup88Q8CEC0 AC125405.2-201ENSMUST00000227862 383 ntBASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Gm37530-201ENSMUST00000191759 4932 ntBASIC8.01□□□□□ -1.13
Nup88Q8CEC0 AC152922.2-201ENSMUST00000213353 3879 ntBASIC8.01□□□□□ -1.13
Nup88Q8CEC0 AC154406.1-201ENSMUST00000215220 2529 ntBASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
Nup88Q8CEC0 AC122769.1-201ENSMUST00000226930 1714 ntBASIC8□□□□□ -1.13
Nup88Q8CEC0 Gm18359-201ENSMUST00000173024 1459 ntBASIC8□□□□□ -1.13
Nup88Q8CEC0 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC8□□□□□ -1.13
Nup88Q8CEC0 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Nup88Q8CEC0 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Nup88Q8CEC0 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC8□□□□□ -1.13
Nup88Q8CEC0 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Nup88Q8CEC0 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC8□□□□□ -1.13
Nup88Q8CEC0 Gm12713-201ENSMUST00000118404 764 ntBASIC8□□□□□ -1.13
Nup88Q8CEC0 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC8□□□□□ -1.13
Nup88Q8CEC0 Gm11198-201ENSMUST00000119771 974 ntBASIC8□□□□□ -1.13
Nup88Q8CEC0 Gm12630-201ENSMUST00000121575 784 ntBASIC8□□□□□ -1.13
Nup88Q8CEC0 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC8□□□□□ -1.13
Nup88Q8CEC0 Gm23891-201ENSMUST00000158114 138 ntBASIC8□□□□□ -1.13
Nup88Q8CEC0 Gm25660-201ENSMUST00000158470 104 ntBASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms