Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 AC132587.1-201ENSMUST00000220562 166 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 AC164117.2-201ENSMUST00000222090 327 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm30155-201ENSMUST00000223458 339 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 AC107663.3-201ENSMUST00000225873 601 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 AC130673.1-201ENSMUST00000227992 435 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Snora9-201ENSMUST00000082579 133 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 AC118639.1-203ENSMUST00000228425 2016 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm37199-201ENSMUST00000193881 4065 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 AC124680.1-201ENSMUST00000223923 1585 ntBASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm43430-201ENSMUST00000196513 3897 ntBASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm11558-201ENSMUST00000118454 459 ntBASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm12219-201ENSMUST00000119198 443 ntBASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm14053-201ENSMUST00000121662 470 ntBASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm13828-201ENSMUST00000122278 363 ntBASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm26167-201ENSMUST00000158423 253 ntBASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm7281-201ENSMUST00000160010 543 ntBASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm5181-201ENSMUST00000183140 971 ntBASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm28859-201ENSMUST00000186650 616 ntBASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm38360-201ENSMUST00000195130 454 ntBASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm38221-201ENSMUST00000195146 365 ntBASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm38109-201ENSMUST00000195386 181 ntBASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm43287-201ENSMUST00000197747 600 ntBASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm8556-201ENSMUST00000210437 664 ntBASIC8.61□□□□□ -1.03
Trim47Q8C0E3 AC154806.1-202ENSMUST00000227949 885 ntBASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm17199-201ENSMUST00000097296 416 ntBASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Trim47Q8C0E3 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms