Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Gm11622-201ENSMUST00000120525 691 ntBASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Gm3810-201ENSMUST00000122413 476 ntBASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Gm4904-201ENSMUST00000178243 1195 ntBASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Gm44163-201ENSMUST00000205140 475 ntBASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Gm45701-201ENSMUST00000212049 235 ntBASIC9.39□□□□□ -0.91
Usp40Q8BWR4 AC118006.2-201ENSMUST00000224167 962 ntBASIC9.39□□□□□ -0.91
Usp40Q8BWR4 AC123656.1-201ENSMUST00000227121 581 ntBASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Gm43612-201ENSMUST00000196087 3207 ntBASIC9.39□□□□□ -0.91
Usp40Q8BWR4 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Gm37593-201ENSMUST00000191669 3254 ntBASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Gm9839-201ENSMUST00000195252 1437 ntBASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Gm44022-201ENSMUST00000203708 5429 ntBASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Gm37783-201ENSMUST00000192025 1856 ntBASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Gm28359-201ENSMUST00000187470 1322 ntBASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Gm14733-201ENSMUST00000117680 133 ntBASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Gm14745-201ENSMUST00000118480 1096 ntBASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Gm12140-201ENSMUST00000121214 544 ntBASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Gm11341-201ENSMUST00000122316 447 ntBASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Gm28620-201ENSMUST00000190463 439 ntBASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Gm37631-201ENSMUST00000192275 364 ntBASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Gm44554-201ENSMUST00000208738 147 ntBASIC9.38□□□□□ -0.91
Usp40Q8BWR4 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Gm18586-201ENSMUST00000217265 518 ntBASIC9.38□□□□□ -0.91
Usp40Q8BWR4 AC153522.1-201ENSMUST00000220047 1090 ntBASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Gm26130-201ENSMUST00000083171 138 ntBASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Gm26967-201ENSMUST00000182878 2303 ntBASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp40Q8BWR4 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Gm3555-201ENSMUST00000160287 1395 ntBASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 AC129308.2-203ENSMUST00000224109 2385 ntBASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Gm4927-201ENSMUST00000219548 1318 ntBASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Gm43099-201ENSMUST00000198943 5241 ntBASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Mir669o-201ENSMUST00000103898 96 ntBASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Rnu11-201ENSMUST00000104135 134 ntBASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Gm14746-201ENSMUST00000120309 741 ntBASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Gm14739-201ENSMUST00000120424 802 ntBASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Gm3140-201ENSMUST00000163523 481 ntBASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Gm25675-201ENSMUST00000174979 118 ntBASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Mir7082-201ENSMUST00000183526 92 ntBASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Gm27507-201ENSMUST00000184199 93 ntBASIC9.37□□□□□ -0.91
Usp40Q8BWR4 Gm18752-201ENSMUST00000192876 608 ntBASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms