Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Usp54Q8BL06 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Usp54Q8BL06 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC9.54□□□□□ -0.88
Usp54Q8BL06 Gm42930-201ENSMUST00000200872 3260 ntBASIC9.54□□□□□ -0.88
Usp54Q8BL06 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC9.54□□□□□ -0.88
Usp54Q8BL06 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Usp54Q8BL06 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usp54Q8BL06 Ccdc141-207ENSMUST00000164114 6222 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Usp54Q8BL06 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usp54Q8BL06 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Usp54Q8BL06 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usp54Q8BL06 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usp54Q8BL06 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC9.54□□□□□ -0.88
Usp54Q8BL06 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usp54Q8BL06 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usp54Q8BL06 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC9.54□□□□□ -0.88
Usp54Q8BL06 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Usp54Q8BL06 Gm22103-201ENSMUST00000116733 121 ntBASIC9.54□□□□□ -0.88
Usp54Q8BL06 Gm26475-201ENSMUST00000116769 121 ntBASIC9.54□□□□□ -0.88
Usp54Q8BL06 Gm23620-201ENSMUST00000116812 121 ntBASIC9.54□□□□□ -0.88
Usp54Q8BL06 Gm25042-201ENSMUST00000116856 121 ntBASIC9.54□□□□□ -0.88
Usp54Q8BL06 Gm25540-201ENSMUST00000116880 121 ntBASIC9.54□□□□□ -0.88
Usp54Q8BL06 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC9.54□□□□□ -0.88
Usp54Q8BL06 Gm27854-201ENSMUST00000175578 244 ntBASIC9.54□□□□□ -0.88
Usp54Q8BL06 Gm23550-201ENSMUST00000179003 121 ntBASIC9.54□□□□□ -0.88
Usp54Q8BL06 Gm25123-201ENSMUST00000179154 121 ntBASIC9.54□□□□□ -0.88
Usp54Q8BL06 Gm25353-201ENSMUST00000179366 121 ntBASIC9.54□□□□□ -0.88
Usp54Q8BL06 Gm22992-201ENSMUST00000179496 121 ntBASIC9.54□□□□□ -0.88
Usp54Q8BL06 Gm25892-201ENSMUST00000179867 121 ntBASIC9.54□□□□□ -0.88
Usp54Q8BL06 Gm24092-201ENSMUST00000180257 121 ntBASIC9.54□□□□□ -0.88
Usp54Q8BL06 Gm37689-201ENSMUST00000193139 275 ntBASIC9.54□□□□□ -0.88
Usp54Q8BL06 Gm37784-201ENSMUST00000193233 189 ntBASIC9.54□□□□□ -0.88
Usp54Q8BL06 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC9.54□□□□□ -0.88
Usp54Q8BL06 Gm31861-201ENSMUST00000204563 672 ntBASIC9.54□□□□□ -0.88
Usp54Q8BL06 Gm45127-201ENSMUST00000205984 1015 ntBASIC9.54□□□□□ -0.88
Usp54Q8BL06 AC155941.1-201ENSMUST00000220223 529 ntBASIC9.54□□□□□ -0.88
Usp54Q8BL06 Zfp850-201ENSMUST00000099111 941 ntBASIC9.54□□□□□ -0.88
Usp54Q8BL06 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Gm2223-201ENSMUST00000112099 1350 ntBASIC9.53□□□□□ -0.88
Usp54Q8BL06 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC9.53□□□□□ -0.88
Usp54Q8BL06 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Gm11976-201ENSMUST00000119236 295 ntBASIC9.53□□□□□ -0.88
Usp54Q8BL06 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC9.53□□□□□ -0.88
Usp54Q8BL06 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Gm22820-201ENSMUST00000157205 329 ntBASIC9.53□□□□□ -0.88
Usp54Q8BL06 Gm27210-201ENSMUST00000184263 402 ntBASIC9.53□□□□□ -0.88
Usp54Q8BL06 Gm29357-201ENSMUST00000186877 698 ntBASIC9.53□□□□□ -0.88
Usp54Q8BL06 Ighv1-44-201ENSMUST00000195597 352 ntBASIC9.53□□□□□ -0.88
Usp54Q8BL06 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Gm45734-201ENSMUST00000211916 411 ntBASIC9.53□□□□□ -0.88
Usp54Q8BL06 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Gm19195-201ENSMUST00000222018 511 ntBASIC9.53□□□□□ -0.88
Usp54Q8BL06 AC154646.1-201ENSMUST00000225011 1092 ntBASIC9.53□□□□□ -0.88
Usp54Q8BL06 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Usp54Q8BL06 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC9.53□□□□□ -0.88
Usp54Q8BL06 Gm42763-201ENSMUST00000199595 2087 ntBASIC9.53□□□□□ -0.88
Usp54Q8BL06 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Usp54Q8BL06 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Usp54Q8BL06 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
Usp54Q8BL06 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Usp54Q8BL06 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Usp54Q8BL06 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Usp54Q8BL06 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC9.52□□□□□ -0.89
Usp54Q8BL06 Ebpl-201ENSMUST00000022494 10092 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Usp54Q8BL06 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Usp54Q8BL06 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Usp54Q8BL06 Mup-ps16-201ENSMUST00000120085 596 ntBASIC9.52□□□□□ -0.89
Usp54Q8BL06 Gm25363-201ENSMUST00000158850 245 ntBASIC9.52□□□□□ -0.89
Usp54Q8BL06 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC9.52□□□□□ -0.89
Usp54Q8BL06 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Usp54Q8BL06 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Usp54Q8BL06 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Usp54Q8BL06 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Usp54Q8BL06 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Usp54Q8BL06 Mir6367-201ENSMUST00000183385 102 ntBASIC9.52□□□□□ -0.89
Usp54Q8BL06 Mir7220-201ENSMUST00000183978 60 ntBASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 127.5 ms