Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col8a1Q00780 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col8a1Q00780 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Bcas3-204ENSMUST00000108056 2925 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC6.39□□□□□ -1.39
Col8a1Q00780 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Arhgap17-204ENSMUST00000205262 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col8a1Q00780 AC170188.1-201ENSMUST00000223710 1963 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Col8a1Q00780 Proz-201ENSMUST00000033822 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Wwp1-202ENSMUST00000108246 6440 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Eps15l1-205ENSMUST00000212590 3376 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm29113-201ENSMUST00000185991 3432 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm4919-201ENSMUST00000117825 604 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm15913-201ENSMUST00000118492 331 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm11348-201ENSMUST00000118813 318 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm6654-201ENSMUST00000118950 348 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm11928-201ENSMUST00000119323 437 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm13921-201ENSMUST00000119411 463 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm11955-201ENSMUST00000119801 470 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm12451-201ENSMUST00000121636 633 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm13586-201ENSMUST00000121784 464 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm6044-201ENSMUST00000121819 499 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm14353-201ENSMUST00000122200 869 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Col8a1Q00780 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm5125-201ENSMUST00000148614 624 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC6.38□□□□□ -1.39
Col8a1Q00780 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm18588-201ENSMUST00000177308 492 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC6.38□□□□□ -1.39
Col8a1Q00780 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm29562-201ENSMUST00000190113 904 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm37196-201ENSMUST00000194762 906 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm42424-201ENSMUST00000198319 376 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm43840-201ENSMUST00000199444 484 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm4602-201ENSMUST00000203198 308 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm45446-201ENSMUST00000209348 216 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm18414-201ENSMUST00000210858 694 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC6.38□□□□□ -1.39
Col8a1Q00780 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.38□□□□□ -1.39
Col8a1Q00780 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Col8a1Q00780 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 AC154382.1-201ENSMUST00000220958 1282 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 AC154692.1-201ENSMUST00000228314 544 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col8a1Q00780 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm22287-201ENSMUST00000083197 107 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm26264-201ENSMUST00000083278 159 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm7869-201ENSMUST00000121457 1322 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Col8a1Q00780 AC164297.4-201ENSMUST00000224225 1307 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 AC124426.1-203ENSMUST00000221814 1362 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm15575-201ENSMUST00000119414 1581 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC6.38□□□□□ -1.39
Col8a1Q00780 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC6.38□□□□□ -1.39
Col8a1Q00780 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 AC130219.1-201ENSMUST00000228406 3433 ntBASIC6.38□□□□□ -1.39
Col8a1Q00780 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col8a1Q00780 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Col8a1Q00780 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Col8a1Q00780 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col8a1Q00780 A830036E02Rik-202ENSMUST00000128904 2768 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col8a1Q00780 Gm42546-201ENSMUST00000201584 2592 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms