Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Plekhb2-203ENSMUST00000156687 5176 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Brd8-204ENSMUST00000115766 4258 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Wnk1-218ENSMUST00000161512 1426 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 Gm43618-201ENSMUST00000197392 3451 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Elmo1-201ENSMUST00000072519 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PrkdcP97313 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Gm43627-201ENSMUST00000197119 2299 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 Gm15480-201ENSMUST00000120442 519 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC4.47□□□□□ -1.69
PrkdcP97313 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC4.47□□□□□ -1.69
PrkdcP97313 Gm26312-201ENSMUST00000157769 165 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC4.47□□□□□ -1.69
PrkdcP97313 Gm46364-201ENSMUST00000218548 319 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
PrkdcP97313 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Adamtsl3-203ENSMUST00000173287 7249 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
PrkdcP97313 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC4.47□□□□□ -1.69
PrkdcP97313 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
PrkdcP97313 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Gm8317-201ENSMUST00000121261 471 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 Gm11909-201ENSMUST00000121424 759 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
PrkdcP97313 Gm26172-201ENSMUST00000158421 134 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 Gm22355-201ENSMUST00000175531 96 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Gm27543-201ENSMUST00000183562 177 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Gm37725-201ENSMUST00000193965 2125 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 Gm43212-201ENSMUST00000198208 394 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC4.47□□□□□ -1.69
PrkdcP97313 CT009738.1-201ENSMUST00000219031 809 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 Gm24200-201ENSMUST00000082955 157 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 Mir375-201ENSMUST00000083682 64 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC4.47□□□□□ -1.69
PrkdcP97313 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Gm45746-201ENSMUST00000212623 2447 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 Tbc1d24-203ENSMUST00000097376 7265 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Sf3b3-201ENSMUST00000042012 4525 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PrkdcP97313 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PrkdcP97313 Gm24173-201ENSMUST00000104130 128 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC4.47□□□□□ -1.69
PrkdcP97313 Gm27006-201ENSMUST00000182218 943 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC4.47□□□□□ -1.69
PrkdcP97313 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PrkdcP97313 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC4.47□□□□□ -1.69
PrkdcP97313 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PrkdcP97313 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PrkdcP97313 Gm18310-201ENSMUST00000206494 3912 ntBASIC4.47□□□□□ -1.69
PrkdcP97313 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
PrkdcP97313 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
PrkdcP97313 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
PrkdcP97313 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
PrkdcP97313 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.69
PrkdcP97313 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
PrkdcP97313 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC4.46□□□□□ -1.69
PrkdcP97313 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC4.46□□□□□ -1.69
PrkdcP97313 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC4.46□□□□□ -1.69
PrkdcP97313 Gm28188-201ENSMUST00000190483 236 ntBASIC4.46□□□□□ -1.69
PrkdcP97313 Gm6119-201ENSMUST00000193443 1206 ntBASIC4.46□□□□□ -1.69
PrkdcP97313 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC4.46□□□□□ -1.69
PrkdcP97313 Gm45473-201ENSMUST00000211452 616 ntBASIC4.46□□□□□ -1.69
PrkdcP97313 AC124826.1-201ENSMUST00000221651 325 ntBASIC4.46□□□□□ -1.69
PrkdcP97313 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
PrkdcP97313 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PrkdcP97313 Gm43422-201ENSMUST00000199780 3571 ntBASIC4.46□□□□□ -1.7
PrkdcP97313 Mcf2-202ENSMUST00000063507 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PrkdcP97313 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PrkdcP97313 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
PrkdcP97313 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC4.46□□□□□ -1.7
PrkdcP97313 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PrkdcP97313 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PrkdcP97313 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PrkdcP97313 Paqr8-204ENSMUST00000189400 5330 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms