Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm5843-201ENSMUST00000121631 476 ntBASIC7.45□□□□□ -1.22
CiitaP79621 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CiitaP79621 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC7.45□□□□□ -1.22
CiitaP79621 Gm23891-201ENSMUST00000158114 138 ntBASIC7.45□□□□□ -1.22
CiitaP79621 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
CiitaP79621 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.45□□□□□ -1.22
CiitaP79621 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC7.45□□□□□ -1.22
CiitaP79621 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC7.45□□□□□ -1.22
CiitaP79621 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC7.45□□□□□ -1.22
CiitaP79621 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC7.45□□□□□ -1.22
CiitaP79621 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC7.45□□□□□ -1.22
CiitaP79621 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC7.45□□□□□ -1.22
CiitaP79621 Gm7452-201ENSMUST00000200764 788 ntBASIC7.45□□□□□ -1.22
CiitaP79621 Gm43928-201ENSMUST00000203737 409 ntBASIC7.45□□□□□ -1.22
CiitaP79621 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC7.45□□□□□ -1.22
CiitaP79621 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC7.45□□□□□ -1.22
CiitaP79621 Gm18914-201ENSMUST00000214625 616 ntBASIC7.45□□□□□ -1.22
CiitaP79621 AC124489.3-201ENSMUST00000224037 278 ntBASIC7.45□□□□□ -1.22
CiitaP79621 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CiitaP79621 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
CiitaP79621 Gm25587-201ENSMUST00000082498 166 ntBASIC7.45□□□□□ -1.22
CiitaP79621 Gm24621-201ENSMUST00000082679 140 ntBASIC7.45□□□□□ -1.22
CiitaP79621 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC7.45□□□□□ -1.22
CiitaP79621 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CiitaP79621 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CiitaP79621 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CiitaP79621 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CiitaP79621 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CiitaP79621 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CiitaP79621 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
CiitaP79621 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC7.45□□□□□ -1.22
CiitaP79621 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CiitaP79621 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
CiitaP79621 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
CiitaP79621 Gm14373-201ENSMUST00000122467 2158 ntBASIC7.44□□□□□ -1.22
CiitaP79621 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CiitaP79621 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CiitaP79621 Gm43789-201ENSMUST00000199275 2472 ntBASIC7.44□□□□□ -1.22
CiitaP79621 Gm44704-201ENSMUST00000208963 1990 ntBASIC7.44□□□□□ -1.22
CiitaP79621 Gm37548-201ENSMUST00000194519 3814 ntBASIC7.44□□□□□ -1.22
CiitaP79621 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CiitaP79621 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CiitaP79621 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CiitaP79621 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CiitaP79621 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.44□□□□□ -1.22
CiitaP79621 Gm6011-201ENSMUST00000211736 1796 ntBASIC7.44□□□□□ -1.22
CiitaP79621 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CiitaP79621 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CiitaP79621 Gm16073-201ENSMUST00000116032 517 ntBASIC7.44□□□□□ -1.22
CiitaP79621 Gm13983-201ENSMUST00000118018 865 ntBASIC7.44□□□□□ -1.22
CiitaP79621 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
CiitaP79621 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC7.44□□□□□ -1.22
CiitaP79621 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
CiitaP79621 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC7.44□□□□□ -1.22
CiitaP79621 Gm16298-201ENSMUST00000161107 420 ntBASIC7.44□□□□□ -1.22
CiitaP79621 Gm23968-201ENSMUST00000175047 125 ntBASIC7.44□□□□□ -1.22
CiitaP79621 Gm5871-201ENSMUST00000176461 718 ntBASIC7.44□□□□□ -1.22
CiitaP79621 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC7.44□□□□□ -1.22
CiitaP79621 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CiitaP79621 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC7.44□□□□□ -1.22
CiitaP79621 Gm9504-201ENSMUST00000196322 468 ntBASIC7.44□□□□□ -1.22
CiitaP79621 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.44□□□□□ -1.22
CiitaP79621 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CiitaP79621 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC7.44□□□□□ -1.22
CiitaP79621 Gm18040-201ENSMUST00000217922 827 ntBASIC7.44□□□□□ -1.22
CiitaP79621 Gm46203-201ENSMUST00000218130 478 ntBASIC7.44□□□□□ -1.22
CiitaP79621 AC079644.2-201ENSMUST00000220581 322 ntBASIC7.44□□□□□ -1.22
CiitaP79621 AC114008.1-201ENSMUST00000226193 937 ntBASIC7.44□□□□□ -1.22
CiitaP79621 AC132833.4-201ENSMUST00000228313 203 ntBASIC7.44□□□□□ -1.22
CiitaP79621 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CiitaP79621 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CiitaP79621 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CiitaP79621 Gm29486-201ENSMUST00000088648 372 ntBASIC7.44□□□□□ -1.22
CiitaP79621 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CiitaP79621 Gm43526-201ENSMUST00000196666 1565 ntBASIC7.44□□□□□ -1.22
CiitaP79621 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CiitaP79621 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CiitaP79621 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
CiitaP79621 Gm9403-201ENSMUST00000196299 2181 ntBASIC7.44□□□□□ -1.22
CiitaP79621 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CiitaP79621 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CiitaP79621 Gm18508-201ENSMUST00000215790 1642 ntBASIC7.44□□□□□ -1.22
CiitaP79621 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC7.44□□□□□ -1.22
CiitaP79621 Gm14849-201ENSMUST00000122293 2846 ntBASIC7.44□□□□□ -1.22
CiitaP79621 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC7.44□□□□□ -1.22
CiitaP79621 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
CiitaP79621 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CiitaP79621 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
CiitaP79621 Gm38009-201ENSMUST00000194884 3341 ntBASIC7.44□□□□□ -1.22
CiitaP79621 Gm37474-201ENSMUST00000194812 1814 ntBASIC7.43□□□□□ -1.22
CiitaP79621 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CiitaP79621 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CiitaP79621 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CiitaP79621 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CiitaP79621 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
CiitaP79621 Gm43410-201ENSMUST00000197510 2234 ntBASIC7.43□□□□□ -1.22
CiitaP79621 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CiitaP79621 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CiitaP79621 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CiitaP79621 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms