Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC7.06□□□□□ -1.28
Nup43P59235 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Nup43P59235 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Nup43P59235 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Nup43P59235 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Nup43P59235 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Nup43P59235 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC7.06□□□□□ -1.28
Nup43P59235 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Nup43P59235 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Nup43P59235 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
Nup43P59235 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Nup43P59235 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC7.05□□□□□ -1.28
Nup43P59235 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Gm23701-201ENSMUST00000103893 110 ntBASIC7.05□□□□□ -1.28
Nup43P59235 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC7.05□□□□□ -1.28
Nup43P59235 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC7.05□□□□□ -1.28
Nup43P59235 Gm25848-201ENSMUST00000116790 144 ntBASIC7.05□□□□□ -1.28
Nup43P59235 Gm11810-201ENSMUST00000118311 333 ntBASIC7.05□□□□□ -1.28
Nup43P59235 Gm15913-201ENSMUST00000118492 331 ntBASIC7.05□□□□□ -1.28
Nup43P59235 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC7.05□□□□□ -1.28
Nup43P59235 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Gm24647-201ENSMUST00000157112 113 ntBASIC7.05□□□□□ -1.28
Nup43P59235 Gm22948-201ENSMUST00000158561 243 ntBASIC7.05□□□□□ -1.28
Nup43P59235 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC7.05□□□□□ -1.28
Nup43P59235 Gm27458-201ENSMUST00000185108 121 ntBASIC7.05□□□□□ -1.28
Nup43P59235 Gm2617-201ENSMUST00000185690 1066 ntBASIC7.05□□□□□ -1.28
Nup43P59235 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC7.05□□□□□ -1.28
Nup43P59235 Gm18150-201ENSMUST00000195341 645 ntBASIC7.05□□□□□ -1.28
Nup43P59235 Gm37585-201ENSMUST00000195440 280 ntBASIC7.05□□□□□ -1.28
Nup43P59235 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Nup43P59235 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC7.05□□□□□ -1.28
Nup43P59235 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC7.05□□□□□ -1.28
Nup43P59235 AC115047.1-201ENSMUST00000213795 322 ntBASIC7.05□□□□□ -1.28
Nup43P59235 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC7.05□□□□□ -1.28
Nup43P59235 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC7.05□□□□□ -1.28
Nup43P59235 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC7.05□□□□□ -1.28
Nup43P59235 Gm5374-201ENSMUST00000222868 657 ntBASIC7.05□□□□□ -1.28
Nup43P59235 AC159301.1-202ENSMUST00000225860 2133 ntBASIC7.05□□□□□ -1.28
Nup43P59235 AC107453.3-201ENSMUST00000228205 639 ntBASIC7.05□□□□□ -1.28
Nup43P59235 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Gm25852-201ENSMUST00000082790 130 ntBASIC7.05□□□□□ -1.28
Nup43P59235 Gm24613-201ENSMUST00000083266 130 ntBASIC7.05□□□□□ -1.28
Nup43P59235 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC7.05□□□□□ -1.28
Nup43P59235 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC7.05□□□□□ -1.28
Nup43P59235 AC164433.1-201ENSMUST00000226138 1544 ntBASIC7.05□□□□□ -1.28
Nup43P59235 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Nup43P59235 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Nup43P59235 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
Nup43P59235 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
Nup43P59235 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC7.05□□□□□ -1.28
Nup43P59235 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC7.05□□□□□ -1.28
Nup43P59235 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC7.05□□□□□ -1.28
Nup43P59235 Gm45737-201ENSMUST00000208344 1612 ntBASIC7.05□□□□□ -1.28
Nup43P59235 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Nup43P59235 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
Nup43P59235 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Nup43P59235 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Nup43P59235 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Nup43P59235 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Nup43P59235 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Nup43P59235 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Nup43P59235 AC123832.1-201ENSMUST00000214120 2371 ntBASIC7.04□□□□□ -1.28
Nup43P59235 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Nup43P59235 Gm2654-201ENSMUST00000221381 1592 ntBASIC7.04□□□□□ -1.28
Nup43P59235 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Nup43P59235 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC7.04□□□□□ -1.28
Nup43P59235 Gm42771-201ENSMUST00000198342 2486 ntBASIC7.04□□□□□ -1.28
Nup43P59235 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Nup43P59235 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Nup43P59235 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Nup43P59235 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Nup43P59235 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Nup43P59235 Gm14891-201ENSMUST00000117378 596 ntBASIC7.04□□□□□ -1.28
Nup43P59235 Gm5759-201ENSMUST00000119203 811 ntBASIC7.04□□□□□ -1.28
Nup43P59235 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Nup43P59235 Defa-ps10-201ENSMUST00000121649 171 ntBASIC7.04□□□□□ -1.28
Nup43P59235 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC7.04□□□□□ -1.28
Nup43P59235 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC7.04□□□□□ -1.28
Nup43P59235 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Nup43P59235 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms