Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.61□□□□□ -1.35
Sox3P53784 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Sox3P53784 Gm25505-201ENSMUST00000157220 246 ntBASIC6.61□□□□□ -1.35
Sox3P53784 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.61□□□□□ -1.35
Sox3P53784 Gm8305-201ENSMUST00000180022 1195 ntBASIC6.61□□□□□ -1.35
Sox3P53784 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC6.61□□□□□ -1.35
Sox3P53784 Gm29354-201ENSMUST00000187613 696 ntBASIC6.61□□□□□ -1.35
Sox3P53784 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC6.61□□□□□ -1.35
Sox3P53784 Gm37689-201ENSMUST00000193139 275 ntBASIC6.61□□□□□ -1.35
Sox3P53784 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Sox3P53784 Trbv9-201ENSMUST00000194494 290 ntBASIC6.61□□□□□ -1.35
Sox3P53784 Gm42752-201ENSMUST00000198394 1106 ntBASIC6.61□□□□□ -1.35
Sox3P53784 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Sox3P53784 Gm44192-201ENSMUST00000204195 556 ntBASIC6.61□□□□□ -1.35
Sox3P53784 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC6.61□□□□□ -1.35
Sox3P53784 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.61□□□□□ -1.35
Sox3P53784 AC153936.1-201ENSMUST00000219874 395 ntBASIC6.61□□□□□ -1.35
Sox3P53784 AC124601.1-201ENSMUST00000220531 135 ntBASIC6.61□□□□□ -1.35
Sox3P53784 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.61□□□□□ -1.35
Sox3P53784 AC122309.1-201ENSMUST00000226945 421 ntBASIC6.61□□□□□ -1.35
Sox3P53784 AC125405.2-201ENSMUST00000227862 383 ntBASIC6.61□□□□□ -1.35
Sox3P53784 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Sox3P53784 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox3P53784 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Sox3P53784 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC6.61□□□□□ -1.35
Sox3P53784 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Sox3P53784 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Sox3P53784 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox3P53784 Gm42969-201ENSMUST00000199858 3631 ntBASIC6.61□□□□□ -1.35
Sox3P53784 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox3P53784 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox3P53784 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC6.61□□□□□ -1.35
Sox3P53784 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox3P53784 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Sox3P53784 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.61□□□□□ -1.35
Sox3P53784 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Sox3P53784 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 AC111010.1-203ENSMUST00000227287 1548 ntBASIC6.6□□□□□ -1.35
Sox3P53784 Gm26945-201ENSMUST00000183191 2011 ntBASIC6.6□□□□□ -1.35
Sox3P53784 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Sox3P53784 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Sox3P53784 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.6□□□□□ -1.35
Sox3P53784 CT010470.1-201ENSMUST00000225364 1876 ntBASIC6.6□□□□□ -1.35
Sox3P53784 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 Gm42462-201ENSMUST00000196543 1363 ntBASIC6.6□□□□□ -1.35
Sox3P53784 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 Gm26340-201ENSMUST00000102365 99 ntBASIC6.6□□□□□ -1.35
Sox3P53784 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Sox3P53784 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Sox3P53784 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 Gm14054-201ENSMUST00000120744 704 ntBASIC6.6□□□□□ -1.35
Sox3P53784 Gm2735-201ENSMUST00000136133 277 ntBASIC6.6□□□□□ -1.35
Sox3P53784 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.6□□□□□ -1.35
Sox3P53784 Gm25395-201ENSMUST00000157343 272 ntBASIC6.6□□□□□ -1.35
Sox3P53784 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Sox3P53784 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 Gm20702-201ENSMUST00000176181 460 ntBASIC6.6□□□□□ -1.35
Sox3P53784 Gm21756-201ENSMUST00000178380 930 ntBASIC6.6□□□□□ -1.35
Sox3P53784 Gm21405-201ENSMUST00000179024 930 ntBASIC6.6□□□□□ -1.35
Sox3P53784 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Sox3P53784 Gm27507-201ENSMUST00000184199 93 ntBASIC6.6□□□□□ -1.35
Sox3P53784 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.6□□□□□ -1.35
Sox3P53784 Gm27804-201ENSMUST00000185135 119 ntBASIC6.6□□□□□ -1.35
Sox3P53784 Gm21191-201ENSMUST00000186484 930 ntBASIC6.6□□□□□ -1.35
Sox3P53784 Gm28195-201ENSMUST00000186992 372 ntBASIC6.6□□□□□ -1.35
Sox3P53784 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 Gm29503-201ENSMUST00000191044 930 ntBASIC6.6□□□□□ -1.35
Sox3P53784 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 Gm37349-201ENSMUST00000194205 624 ntBASIC6.6□□□□□ -1.35
Sox3P53784 Gm2860-201ENSMUST00000199226 707 ntBASIC6.6□□□□□ -1.35
Sox3P53784 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 Gm4972-201ENSMUST00000211108 1254 ntBASIC6.6□□□□□ -1.35
Sox3P53784 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC6.6□□□□□ -1.35
Sox3P53784 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Sox3P53784 CT009738.1-201ENSMUST00000219031 809 ntBASIC6.6□□□□□ -1.35
Sox3P53784 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC6.6□□□□□ -1.35
Sox3P53784 CT009728.1-201ENSMUST00000225228 1050 ntBASIC6.6□□□□□ -1.35
Sox3P53784 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Sox3P53784 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.6□□□□□ -1.35
Sox3P53784 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Sox3P53784 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.6□□□□□ -1.35
Sox3P53784 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Sox3P53784 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.6□□□□□ -1.35
Sox3P53784 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Sox3P53784 Gm6679-201ENSMUST00000191467 1869 ntBASIC6.6□□□□□ -1.35
Sox3P53784 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.6□□□□□ -1.35
Sox3P53784 Gm14035-201ENSMUST00000117596 1475 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms