Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Cxcl12P40224 Gm7134-201ENSMUST00000122296 2406 ntBASIC7.08□□□□□ -1.28
Cxcl12P40224 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Cxcl12P40224 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Cxcl12P40224 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Cxcl12P40224 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Cxcl12P40224 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Cxcl12P40224 Gm25346-201ENSMUST00000104509 128 ntBASIC7.08□□□□□ -1.28
Cxcl12P40224 n-R5s72-201ENSMUST00000104518 119 ntBASIC7.08□□□□□ -1.28
Cxcl12P40224 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Cxcl12P40224 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC7.08□□□□□ -1.28
Cxcl12P40224 Gm9658-201ENSMUST00000182757 1012 ntBASIC7.08□□□□□ -1.28
Cxcl12P40224 Gm29234-201ENSMUST00000187452 1262 ntBASIC7.08□□□□□ -1.28
Cxcl12P40224 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Cxcl12P40224 Gm43383-201ENSMUST00000195981 469 ntBASIC7.08□□□□□ -1.28
Cxcl12P40224 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC7.08□□□□□ -1.28
Cxcl12P40224 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC7.08□□□□□ -1.28
Cxcl12P40224 Gm5717-201ENSMUST00000198243 1062 ntBASIC7.08□□□□□ -1.28
Cxcl12P40224 Gm43846-201ENSMUST00000200502 932 ntBASIC7.08□□□□□ -1.28
Cxcl12P40224 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC7.08□□□□□ -1.28
Cxcl12P40224 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC7.08□□□□□ -1.28
Cxcl12P40224 Gm46364-201ENSMUST00000218548 319 ntBASIC7.08□□□□□ -1.28
Cxcl12P40224 Gm9118-201ENSMUST00000219246 754 ntBASIC7.08□□□□□ -1.28
Cxcl12P40224 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.08□□□□□ -1.28
Cxcl12P40224 AC154718.1-201ENSMUST00000226676 250 ntBASIC7.08□□□□□ -1.28
Cxcl12P40224 Gm24695-201ENSMUST00000083877 83 ntBASIC7.08□□□□□ -1.28
Cxcl12P40224 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Cxcl12P40224 CT025535.2-201ENSMUST00000228572 7441 ntBASIC7.08□□□□□ -1.28
Cxcl12P40224 Lcorl-201ENSMUST00000016026 4884 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Cxcl12P40224 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Cxcl12P40224 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Cxcl12P40224 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Cxcl12P40224 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Cxcl12P40224 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Cxcl12P40224 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Cxcl12P40224 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Cxcl12P40224 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Cxcl12P40224 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm9521-201ENSMUST00000206656 1516 ntBASIC7.07□□□□□ -1.28
Cxcl12P40224 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Cxcl12P40224 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
Cxcl12P40224 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm22194-201ENSMUST00000116869 95 ntBASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm13702-201ENSMUST00000118542 825 ntBASIC7.07□□□□□ -1.28
Cxcl12P40224 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC7.07□□□□□ -1.28
Cxcl12P40224 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm24065-201ENSMUST00000157487 264 ntBASIC7.07□□□□□ -1.28
Cxcl12P40224 Mir1960-201ENSMUST00000157488 78 ntBASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm6918-201ENSMUST00000167622 1222 ntBASIC7.07□□□□□ -1.28
Cxcl12P40224 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC7.07□□□□□ -1.28
Cxcl12P40224 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm37322-201ENSMUST00000193409 337 ntBASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm20223-201ENSMUST00000199932 805 ntBASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm8930-201ENSMUST00000201693 768 ntBASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm44239-201ENSMUST00000204228 271 ntBASIC7.07□□□□□ -1.28
Cxcl12P40224 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm45514-201ENSMUST00000211531 689 ntBASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC7.07□□□□□ -1.28
Cxcl12P40224 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC7.07□□□□□ -1.28
Cxcl12P40224 AC154861.1-201ENSMUST00000223767 800 ntBASIC7.07□□□□□ -1.28
Cxcl12P40224 CT009728.1-201ENSMUST00000225228 1050 ntBASIC7.07□□□□□ -1.28
Cxcl12P40224 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Cxcl12P40224 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Cxcl12P40224 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm45903-201ENSMUST00000212891 2898 ntTSL 5 BASIC7.07□□□□□ -1.28
Cxcl12P40224 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Cxcl12P40224 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Fmr1-206ENSMUST00000114657 4076 ntTSL 5 BASIC7.07□□□□□ -1.28
Cxcl12P40224 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Cxcl12P40224 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Gm21846-201ENSMUST00000179257 3073 ntBASIC7.07□□□□□ -1.28
Cxcl12P40224 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Cxcl12P40224 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms