Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Traf1P39428 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Traf1P39428 Gm42668-201ENSMUST00000200747 2487 ntBASIC8.03□□□□□ -1.12
Traf1P39428 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Traf1P39428 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Traf1P39428 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Traf1P39428 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Traf1P39428 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC8.02□□□□□ -1.13
Traf1P39428 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Traf1P39428 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Traf1P39428 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC8.02□□□□□ -1.13
Traf1P39428 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Traf1P39428 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Traf1P39428 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC8.02□□□□□ -1.13
Traf1P39428 Gm13141-201ENSMUST00000117417 456 ntBASIC8.02□□□□□ -1.13
Traf1P39428 Gm12653-201ENSMUST00000117778 561 ntBASIC8.02□□□□□ -1.13
Traf1P39428 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC8.02□□□□□ -1.13
Traf1P39428 Gm10364-202ENSMUST00000153034 1001 ntBASIC8.02□□□□□ -1.13
Traf1P39428 Gm24682-201ENSMUST00000158764 137 ntBASIC8.02□□□□□ -1.13
Traf1P39428 Gm8550-201ENSMUST00000161621 653 ntBASIC8.02□□□□□ -1.13
Traf1P39428 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Traf1P39428 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
Traf1P39428 Gm38177-201ENSMUST00000192213 1040 ntBASIC8.02□□□□□ -1.13
Traf1P39428 Gm37439-201ENSMUST00000193150 856 ntBASIC8.02□□□□□ -1.13
Traf1P39428 AC151967.1-201ENSMUST00000198146 76 ntBASIC8.02□□□□□ -1.13
Traf1P39428 Gm4860-201ENSMUST00000200368 454 ntBASIC8.02□□□□□ -1.13
Traf1P39428 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC8.02□□□□□ -1.13
Traf1P39428 Gm30708-201ENSMUST00000202183 312 ntBASIC8.02□□□□□ -1.13
Traf1P39428 Gm44411-201ENSMUST00000204172 349 ntBASIC8.02□□□□□ -1.13
Traf1P39428 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC8.02□□□□□ -1.13
Traf1P39428 Gm45279-201ENSMUST00000210315 391 ntBASIC8.02□□□□□ -1.13
Traf1P39428 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC8.02□□□□□ -1.13
Traf1P39428 CT030175.1-201ENSMUST00000220822 408 ntBASIC8.02□□□□□ -1.13
Traf1P39428 Gm9315-201ENSMUST00000222696 908 ntBASIC8.02□□□□□ -1.13
Traf1P39428 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC8.02□□□□□ -1.13
Traf1P39428 AC151730.1-201ENSMUST00000226106 448 ntBASIC8.02□□□□□ -1.13
Traf1P39428 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Traf1P39428 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Traf1P39428 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Traf1P39428 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Traf1P39428 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Traf1P39428 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Traf1P39428 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Traf1P39428 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Traf1P39428 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Traf1P39428 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Traf1P39428 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Traf1P39428 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Traf1P39428 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Traf1P39428 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
Traf1P39428 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC8.02□□□□□ -1.13
Traf1P39428 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
Traf1P39428 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Traf1P39428 Gm45876-201ENSMUST00000212698 2709 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Traf1P39428 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Traf1P39428 Gm21036-201ENSMUST00000207544 2611 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Traf1P39428 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Traf1P39428 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Traf1P39428 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Traf1P39428 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Traf1P39428 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Traf1P39428 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC8.01□□□□□ -1.13
Traf1P39428 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Traf1P39428 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Traf1P39428 Gm22256-201ENSMUST00000102291 107 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Traf1P39428 Gm2178-201ENSMUST00000104927 357 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm14863-201ENSMUST00000119648 307 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm12929-201ENSMUST00000122406 370 ntBASIC8.01□□□□□ -1.13
Traf1P39428 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Traf1P39428 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC8.01□□□□□ -1.13
Traf1P39428 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Traf1P39428 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC8.01□□□□□ -1.13
Traf1P39428 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC8.01□□□□□ -1.13
Traf1P39428 Gm28739-201ENSMUST00000185415 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28219-201ENSMUST00000185452 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28542-201ENSMUST00000185545 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28303-201ENSMUST00000185642 747 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm29244-201ENSMUST00000185825 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm29437-201ENSMUST00000185865 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm29412-201ENSMUST00000185869 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28910-201ENSMUST00000185921 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28812-201ENSMUST00000185963 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm29468-201ENSMUST00000185978 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28335-201ENSMUST00000186204 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28854-201ENSMUST00000186218 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28636-201ENSMUST00000186353 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28452-201ENSMUST00000186623 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm29298-201ENSMUST00000186704 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28185-201ENSMUST00000186815 694 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28227-201ENSMUST00000186862 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28796-201ENSMUST00000186905 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm29659-201ENSMUST00000187063 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28473-201ENSMUST00000187325 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28558-201ENSMUST00000187373 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28682-201ENSMUST00000187430 696 ntBASIC8.01□□□□□ -1.13
Traf1P39428 Gm28738-201ENSMUST00000187480 696 ntBASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms