Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Col2a1P28481 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC7.68□□□□□ -1.18
Col2a1P28481 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Col2a1P28481 Gm11920-201ENSMUST00000118491 563 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Gm13222-201ENSMUST00000119638 138 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Gm6977-201ENSMUST00000121568 512 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Gm12438-201ENSMUST00000122034 336 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Rps29-ps-201ENSMUST00000122083 172 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC7.68□□□□□ -1.18
Col2a1P28481 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col2a1P28481 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col2a1P28481 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC7.68□□□□□ -1.18
Col2a1P28481 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC7.68□□□□□ -1.18
Col2a1P28481 Gm26162-201ENSMUST00000157793 132 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col2a1P28481 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col2a1P28481 Mir6971-201ENSMUST00000183497 63 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC7.68□□□□□ -1.18
Col2a1P28481 Gm27970-201ENSMUST00000184854 407 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Gm28885-201ENSMUST00000185615 563 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col2a1P28481 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC7.68□□□□□ -1.18
Col2a1P28481 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Gm44833-201ENSMUST00000208368 331 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC7.68□□□□□ -1.18
Col2a1P28481 AC113031.1-201ENSMUST00000227400 432 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col2a1P28481 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col2a1P28481 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col2a1P28481 Gm43411-201ENSMUST00000196235 1579 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Col2a1P28481 Grik1-209ENSMUST00000227986 2942 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Gm37786-201ENSMUST00000191714 3225 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col2a1P28481 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col2a1P28481 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Col2a1P28481 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col2a1P28481 Gm45191-201ENSMUST00000205846 5439 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC7.68□□□□□ -1.18
Col2a1P28481 Gm37864-201ENSMUST00000195308 3075 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC7.68□□□□□ -1.18
Col2a1P28481 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col2a1P28481 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col2a1P28481 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col2a1P28481 Olfr750-202ENSMUST00000216202 5789 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Col2a1P28481 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC7.68□□□□□ -1.18
Col2a1P28481 Gm45537-201ENSMUST00000211539 2708 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Col2a1P28481 Gm24069-201ENSMUST00000104512 127 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col2a1P28481 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
Col2a1P28481 Gm13455-201ENSMUST00000118767 517 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Gm14018-201ENSMUST00000119042 455 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Gm12152-201ENSMUST00000122465 684 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Gm5125-201ENSMUST00000148614 624 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Gm23031-201ENSMUST00000157998 119 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Col2a1P28481 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC7.68□□□□□ -1.18
Col2a1P28481 Gm6004-201ENSMUST00000173237 1116 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Gm23632-201ENSMUST00000175289 125 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Gm5260-201ENSMUST00000186157 949 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC7.68□□□□□ -1.18
Col2a1P28481 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC7.68□□□□□ -1.18
Col2a1P28481 Gm8637-201ENSMUST00000212919 1085 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 AC154642.1-201ENSMUST00000224173 740 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col2a1P28481 Gm26442-201ENSMUST00000082588 153 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Gm24695-201ENSMUST00000083877 83 ntBASIC7.68□□□□□ -1.18
Col2a1P28481 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col2a1P28481 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col2a1P28481 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Col2a1P28481 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC7.67□□□□□ -1.18
Col2a1P28481 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC7.67□□□□□ -1.18
Col2a1P28481 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC7.67□□□□□ -1.18
Col2a1P28481 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC7.67□□□□□ -1.18
Col2a1P28481 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col2a1P28481 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col2a1P28481 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col2a1P28481 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
Col2a1P28481 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col2a1P28481 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col2a1P28481 Gm28112-201ENSMUST00000190898 1875 ntBASIC7.67□□□□□ -1.18
Col2a1P28481 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col2a1P28481 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col2a1P28481 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col2a1P28481 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC7.67□□□□□ -1.18
Col2a1P28481 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col2a1P28481 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col2a1P28481 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col2a1P28481 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col2a1P28481 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Col2a1P28481 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col2a1P28481 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Col2a1P28481 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Col2a1P28481 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col2a1P28481 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms