Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm42794-201ENSMUST00000197636 835 ntTSL 3 BASIC5.44□□□□□ -1.54
Sdc1P18828 4930448I18Rik-201ENSMUST00000197958 736 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Gm44156-201ENSMUST00000203885 1189 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 Gm45733-201ENSMUST00000212988 437 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC5.44□□□□□ -1.54
Sdc1P18828 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC5.44□□□□□ -1.54
Sdc1P18828 Gm5791-201ENSMUST00000220840 489 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 AC092710.1-201ENSMUST00000221005 192 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 AC117769.2-201ENSMUST00000224612 469 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 AC131033.2-201ENSMUST00000228138 1011 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Uchl4-201ENSMUST00000039011 1162 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sdc1P18828 Gm5250-201ENSMUST00000059065 321 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sdc1P18828 Klk4-201ENSMUST00000007161 1249 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sdc1P18828 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sdc1P18828 6330409D20Rik-201ENSMUST00000009695 1119 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Sdc1P18828 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 AC022775.1-201ENSMUST00000228163 2698 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Sdc1P18828 Gm19024-201ENSMUST00000194681 1319 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Sdc1P18828 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sdc1P18828 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sdc1P18828 Gm37382-201ENSMUST00000193032 1596 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Sdc1P18828 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Sdc1P18828 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC5.43□□□□□ -1.54
Sdc1P18828 Gm11462-201ENSMUST00000117749 562 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 Gm13338-201ENSMUST00000120235 361 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Sdc1P18828 Gm22235-201ENSMUST00000157085 110 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 Gm26211-201ENSMUST00000158578 129 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 Gm24057-201ENSMUST00000158616 302 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Sdc1P18828 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sdc1P18828 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC5.43□□□□□ -1.54
Sdc1P18828 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Sdc1P18828 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Sdc1P18828 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC5.43□□□□□ -1.54
Sdc1P18828 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC5.43□□□□□ -1.54
Sdc1P18828 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Sdc1P18828 Gm43310-201ENSMUST00000198975 820 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.43□□□□□ -1.54
Sdc1P18828 Gm43084-201ENSMUST00000200696 947 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Sdc1P18828 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC5.43□□□□□ -1.54
Sdc1P18828 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Sdc1P18828 Gm44770-201ENSMUST00000205395 1264 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC5.43□□□□□ -1.54
Sdc1P18828 Gm9689-201ENSMUST00000210009 428 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC5.43□□□□□ -1.54
Sdc1P18828 Gm6581-201ENSMUST00000214545 260 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 AC164087.2-201ENSMUST00000216206 1072 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 Gm29783-201ENSMUST00000219398 369 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC5.43□□□□□ -1.54
Sdc1P18828 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC5.43□□□□□ -1.54
Sdc1P18828 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
Sdc1P18828 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Sdc1P18828 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Sdc1P18828 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sdc1P18828 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Sdc1P18828 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Sdc1P18828 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.43□□□□□ -1.54
Sdc1P18828 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sdc1P18828 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sdc1P18828 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Sdc1P18828 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Sdc1P18828 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Sdc1P18828 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Sdc1P18828 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Sdc1P18828 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Sdc1P18828 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Sdc1P18828 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Sdc1P18828 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Sdc1P18828 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
Sdc1P18828 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.43□□□□□ -1.54
Sdc1P18828 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sdc1P18828 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms