Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Gm29435-201ENSMUST00000191310 689 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 Gm36935-201ENSMUST00000192526 292 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 Gm38337-201ENSMUST00000193986 599 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 Gm43226-201ENSMUST00000202438 259 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 Gm44984-201ENSMUST00000207802 394 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC5.61□□□□□ -1.51
Cdx1P18111 Gm45693-201ENSMUST00000211391 1157 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC5.61□□□□□ -1.51
Cdx1P18111 Gm45739-201ENSMUST00000213094 388 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cdx1P18111 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cdx1P18111 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Gm46311-201ENSMUST00000217971 203 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.61□□□□□ -1.51
Cdx1P18111 Gm18503-201ENSMUST00000220340 728 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 AC154849.2-201ENSMUST00000223781 974 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 AC238940.2-201ENSMUST00000224202 330 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 AC165154.2-201ENSMUST00000227310 336 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 AC125539.1-201ENSMUST00000227423 622 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC5.61□□□□□ -1.51
Cdx1P18111 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Cdx1P18111 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Gm37043-201ENSMUST00000194609 3105 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 Gm44130-201ENSMUST00000205157 3004 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Cdx1P18111 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cdx1P18111 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Cdx1P18111 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cdx1P18111 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx1P18111 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx1P18111 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cdx1P18111 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Cdx1P18111 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Gm43515-201ENSMUST00000197930 2141 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx1P18111 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx1P18111 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cdx1P18111 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx1P18111 Slco6b1-202ENSMUST00000178359 1778 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Gm38147-201ENSMUST00000192397 1798 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cdx1P18111 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx1P18111 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx1P18111 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx1P18111 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx1P18111 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC5.6□□□□□ -1.51
Cdx1P18111 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx1P18111 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Cdx1P18111 Mir503-201ENSMUST00000102168 71 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Gm25916-201ENSMUST00000104263 131 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Cdx1P18111 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx1P18111 Gm11864-201ENSMUST00000116179 1220 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Gm24195-201ENSMUST00000116804 137 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Gm12601-201ENSMUST00000118994 846 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.6□□□□□ -1.51
Cdx1P18111 Gm23663-201ENSMUST00000158045 80 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Gm17205-201ENSMUST00000168370 1207 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Gm6838-201ENSMUST00000172851 582 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Gm26784-201ENSMUST00000181666 410 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx1P18111 Gm29355-201ENSMUST00000188178 697 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Gm28953-201ENSMUST00000188336 697 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Gm20788-201ENSMUST00000190538 697 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Gm38203-201ENSMUST00000191815 245 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Gm37395-201ENSMUST00000194721 697 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC5.6□□□□□ -1.51
Cdx1P18111 Gm26413-201ENSMUST00000196783 126 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Gm43157-201ENSMUST00000198223 412 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC5.6□□□□□ -1.51
Cdx1P18111 Gm42804-201ENSMUST00000199701 178 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Gm4605-201ENSMUST00000203148 625 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC5.6□□□□□ -1.51
Cdx1P18111 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC5.6□□□□□ -1.51
Cdx1P18111 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC5.6□□□□□ -1.51
Cdx1P18111 Gm2767-201ENSMUST00000209582 473 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC5.6□□□□□ -1.51
Cdx1P18111 Gcnt2-204ENSMUST00000223570 335 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Diaph3-204ENSMUST00000226254 682 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 AC131029.2-203ENSMUST00000228116 1244 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Cdx1P18111 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms