Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm17366-201ENSMUST00000167629 187 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Gm26381-201ENSMUST00000174895 92 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Col4a1P02463 Mir6952-201ENSMUST00000185092 61 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Col4a1P02463 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC8.18□□□□□ -1.1
Col4a1P02463 Gm42886-201ENSMUST00000199214 466 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Gm3321-201ENSMUST00000200603 1129 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Gm45127-201ENSMUST00000205984 1015 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC8.18□□□□□ -1.1
Col4a1P02463 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Col4a1P02463 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC8.18□□□□□ -1.1
Col4a1P02463 Gm9321-201ENSMUST00000221179 778 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 n-R5s56-201ENSMUST00000082521 105 ntBASIC8.18□□□□□ -1.1
Col4a1P02463 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a1P02463 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a1P02463 4931406P16Rik-201ENSMUST00000085592 5798 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a1P02463 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a1P02463 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a1P02463 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC8.17□□□□□ -1.1
Col4a1P02463 Rian-209ENSMUST00000182406 3476 ntBASIC8.17□□□□□ -1.1
Col4a1P02463 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a1P02463 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a1P02463 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC8.17□□□□□ -1.1
Col4a1P02463 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a1P02463 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a1P02463 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC8.17□□□□□ -1.1
Col4a1P02463 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a1P02463 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
Col4a1P02463 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC8.17□□□□□ -1.1
Col4a1P02463 AC158115.1-201ENSMUST00000222830 3182 ntBASIC8.17□□□□□ -1.1
Col4a1P02463 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a1P02463 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC8.17□□□□□ -1.1
Col4a1P02463 Gm15149-201ENSMUST00000119370 360 ntBASIC8.17□□□□□ -1.1
Col4a1P02463 Gm14695-201ENSMUST00000121721 282 ntBASIC8.17□□□□□ -1.1
Col4a1P02463 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a1P02463 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC8.17□□□□□ -1.1
Col4a1P02463 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC8.17□□□□□ -1.1
Col4a1P02463 Gm25246-201ENSMUST00000175476 69 ntBASIC8.17□□□□□ -1.1
Col4a1P02463 Mir6973b-201ENSMUST00000184185 80 ntBASIC8.17□□□□□ -1.1
Col4a1P02463 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC8.17□□□□□ -1.1
Col4a1P02463 Gm17918-201ENSMUST00000205315 574 ntBASIC8.17□□□□□ -1.1
Col4a1P02463 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC8.17□□□□□ -1.1
Col4a1P02463 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a1P02463 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a1P02463 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC8.17□□□□□ -1.1
Col4a1P02463 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col4a1P02463 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col4a1P02463 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col4a1P02463 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col4a1P02463 Pcdh15-225ENSMUST00000149977 5843 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Col4a1P02463 Pcm1-201ENSMUST00000045218 6624 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a1P02463 Olfr366-202ENSMUST00000214897 5333 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Col4a1P02463 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a1P02463 Cacna1f-202ENSMUST00000115726 6079 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a1P02463 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a1P02463 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col4a1P02463 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
Col4a1P02463 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Col4a1P02463 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Col4a1P02463 CT010514.1-201ENSMUST00000214088 2969 ntBASIC8.17□□□□□ -1.1
Col4a1P02463 Gm20045-201ENSMUST00000192658 5577 ntBASIC8.16□□□□□ -1.1
Col4a1P02463 Mroh2a-201ENSMUST00000061013 7526 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Col4a1P02463 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a1P02463 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC8.16□□□□□ -1.1
Col4a1P02463 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC8.16□□□□□ -1.1
Col4a1P02463 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
Col4a1P02463 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Col4a1P02463 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a1P02463 AC116476.1-201ENSMUST00000226274 2318 ntBASIC8.16□□□□□ -1.1
Col4a1P02463 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a1P02463 Gm5702-201ENSMUST00000185629 2469 ntBASIC8.16□□□□□ -1.1
Col4a1P02463 Gm4853-201ENSMUST00000119359 394 ntBASIC8.16□□□□□ -1.1
Col4a1P02463 Gm16074-201ENSMUST00000119524 444 ntBASIC8.16□□□□□ -1.1
Col4a1P02463 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a1P02463 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a1P02463 Gm18833-201ENSMUST00000173218 862 ntBASIC8.16□□□□□ -1.1
Col4a1P02463 Gm38097-201ENSMUST00000192936 439 ntBASIC8.16□□□□□ -1.1
Col4a1P02463 n-TStga1-201ENSMUST00000199903 109 ntBASIC8.16□□□□□ -1.1
Col4a1P02463 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a1P02463 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC8.16□□□□□ -1.1
Col4a1P02463 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC8.16□□□□□ -1.1
Col4a1P02463 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a1P02463 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Col4a1P02463 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC8.16□□□□□ -1.1
Col4a1P02463 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a1P02463 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Col4a1P02463 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col4a1P02463 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a1P02463 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a1P02463 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a1P02463 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC8.15□□□□□ -1.1
Col4a1P02463 Gm14805-201ENSMUST00000120172 340 ntBASIC8.15□□□□□ -1.1
Col4a1P02463 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC8.15□□□□□ -1.1
Col4a1P02463 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a1P02463 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a1P02463 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC8.15□□□□□ -1.1
Col4a1P02463 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a1P02463 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col4a1P02463 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms