Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 AC122356.1-202ENSMUST00000227328 2758 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm18491-201ENSMUST00000192492 1594 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm37382-201ENSMUST00000193032 1596 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm43872-201ENSMUST00000203218 2213 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm37206-201ENSMUST00000195512 3069 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm41-201ENSMUST00000116183 1023 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm5255-201ENSMUST00000120125 642 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm11809-201ENSMUST00000120923 950 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm12288-201ENSMUST00000121054 1282 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm12920-201ENSMUST00000121818 1186 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm14830-201ENSMUST00000121899 700 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm11188-201ENSMUST00000122382 388 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm24994-201ENSMUST00000157414 121 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm24530-201ENSMUST00000157948 288 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm23220-201ENSMUST00000158115 137 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm5611-201ENSMUST00000164523 852 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm17101-201ENSMUST00000169520 1588 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm4246-201ENSMUST00000172822 216 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Mir199b-201ENSMUST00000175066 110 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm26729-201ENSMUST00000180744 352 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm29168-201ENSMUST00000189953 687 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Trbv9-201ENSMUST00000194494 290 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm42959-201ENSMUST00000202184 212 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm44141-201ENSMUST00000204231 1583 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm9240-201ENSMUST00000206527 742 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm45608-201ENSMUST00000210948 389 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 AC153845.1-201ENSMUST00000213596 428 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm46103-201ENSMUST00000217614 341 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 AC123062.1-201ENSMUST00000221287 481 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 AC166341.5-201ENSMUST00000222206 1400 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 AC146596.1-201ENSMUST00000223507 223 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 AC134860.3-201ENSMUST00000223564 1300 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 AC134414.1-201ENSMUST00000228499 1221 ntBASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Pcdh1F7BJK1 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm37067-201ENSMUST00000195730 1628 ntBASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Pcdh1F7BJK1 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms