Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Serping1-201ENSMUST00000023994 1768 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Gm42981-201ENSMUST00000200184 3252 ntBASIC1.66□□□□□ -2.14
Gm4559A4IF42 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Thap2-201ENSMUST00000020346 3681 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Gm4559A4IF42 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC1.66□□□□□ -2.14
Gm4559A4IF42 Ccnd1-201ENSMUST00000093962 3740 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Frk-202ENSMUST00000170771 3406 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Gm13135-201ENSMUST00000117628 3121 ntBASIC1.66□□□□□ -2.14
Gm4559A4IF42 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Gm43760-201ENSMUST00000202120 3015 ntBASIC1.66□□□□□ -2.14
Gm4559A4IF42 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Gfpt2-201ENSMUST00000020629 2947 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Gm14780-201ENSMUST00000118387 2737 ntBASIC1.66□□□□□ -2.14
Gm4559A4IF42 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 CT009601.1-201ENSMUST00000225567 2705 ntBASIC1.66□□□□□ -2.14
Gm4559A4IF42 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Gm43702-201ENSMUST00000198772 2546 ntBASIC1.66□□□□□ -2.14
Gm4559A4IF42 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC1.66□□□□□ -2.14
Gm4559A4IF42 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Gm4559A4IF42 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC1.65□□□□□ -2.14
Gm4559A4IF42 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC1.65□□□□□ -2.14
Gm4559A4IF42 Cul4b-201ENSMUST00000016681 3354 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Abcd3-204ENSMUST00000197383 3156 ntTSL 5 BASIC1.65□□□□□ -2.14
Gm4559A4IF42 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms