Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim3Q9R1R2 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Gm13735-201ENSMUST00000120217 670 ntBASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Gm7599-201ENSMUST00000121453 796 ntBASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Gm14728-201ENSMUST00000122196 492 ntBASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Mir1930-201ENSMUST00000158799 84 ntBASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Gm9556-201ENSMUST00000182938 940 ntBASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Ighv1-21-201ENSMUST00000194856 351 ntBASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Gm19007-201ENSMUST00000217746 874 ntBASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Gm46424-201ENSMUST00000221567 168 ntBASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC6.47□□□□□ -1.37
Trim3Q9R1R2 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim3Q9R1R2 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.47□□□□□ -1.37
Trim3Q9R1R2 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
Trim3Q9R1R2 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Trim3Q9R1R2 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.46□□□□□ -1.37
Trim3Q9R1R2 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.46□□□□□ -1.37
Trim3Q9R1R2 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.46□□□□□ -1.37
Trim3Q9R1R2 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Trim3Q9R1R2 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC6.46□□□□□ -1.37
Trim3Q9R1R2 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Trim3Q9R1R2 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Trim3Q9R1R2 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.46□□□□□ -1.37
Trim3Q9R1R2 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Gm12740-201ENSMUST00000118794 308 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Gm11903-201ENSMUST00000118958 727 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Gm12535-201ENSMUST00000121025 484 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Gm12181-201ENSMUST00000121448 531 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Gm5834-201ENSMUST00000126680 1026 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC6.46□□□□□ -1.38
Trim3Q9R1R2 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Gm20690-201ENSMUST00000177341 315 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Mir8120-201ENSMUST00000185035 139 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Gm37669-201ENSMUST00000192184 820 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Gm43595-201ENSMUST00000196464 1071 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trim3Q9R1R2 AC108947.1-201ENSMUST00000224274 1000 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Vmn1r41-202ENSMUST00000226337 888 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 AC133958.1-201ENSMUST00000227085 961 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Trim3Q9R1R2 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Snora21-201ENSMUST00000082967 137 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trim3Q9R1R2 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Gm38200-201ENSMUST00000192083 2111 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Gm44704-201ENSMUST00000208963 1990 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Trim3Q9R1R2 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trim3Q9R1R2 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim3Q9R1R2 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms