Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Mir760-201ENSMUST00000103257 119 ntBASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gm25757-201ENSMUST00000103986 123 ntBASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gm5135-201ENSMUST00000121100 573 ntBASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gm4373-201ENSMUST00000178571 556 ntBASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gm27684-201ENSMUST00000183778 80 ntBASIC6.64□□□□□ -1.35
Lima1Q9ERG0 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gm29369-201ENSMUST00000190674 615 ntBASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gm37669-201ENSMUST00000192184 820 ntBASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gm8924-201ENSMUST00000197405 1132 ntBASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gm45100-201ENSMUST00000209153 391 ntBASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gm4247-201ENSMUST00000211441 1042 ntBASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gm5436-201ENSMUST00000058103 643 ntBASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gm5528-201ENSMUST00000076314 480 ntBASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Lima1Q9ERG0 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Mir697-201ENSMUST00000102316 109 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm23437-201ENSMUST00000104036 127 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm24284-201ENSMUST00000104240 142 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm13196-201ENSMUST00000118297 379 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm13463-201ENSMUST00000119020 233 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm14156-201ENSMUST00000121538 483 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm10157-201ENSMUST00000139408 343 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm5656-201ENSMUST00000171020 1096 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm20549-201ENSMUST00000174804 429 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 n-R5s93-201ENSMUST00000180091 119 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm5300-201ENSMUST00000182201 1003 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm5787-201ENSMUST00000183049 1038 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm43147-201ENSMUST00000196944 542 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm36448-201ENSMUST00000199916 438 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm43775-201ENSMUST00000201019 3395 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm44979-201ENSMUST00000206218 287 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm44722-201ENSMUST00000206473 436 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.63□□□□□ -1.35
Lima1Q9ERG0 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms