Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 AC159293.2-201ENSMUST00000222289 424 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 AC154718.1-201ENSMUST00000226676 250 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 AC132317.2-201ENSMUST00000227301 519 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 AC107453.3-201ENSMUST00000228205 639 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm6195-201ENSMUST00000063059 357 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm10247-201ENSMUST00000090395 333 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 AC122346.1-201ENSMUST00000225266 3732 ntBASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Ddx56Q9D0R4 Gm45520-201ENSMUST00000210109 2031 ntBASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Gm37138-201ENSMUST00000194564 2089 ntBASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Gm15054-201ENSMUST00000117393 281 ntBASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Anp32-ps-201ENSMUST00000118265 388 ntBASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Gm14610-201ENSMUST00000118358 966 ntBASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Gm12740-201ENSMUST00000118794 308 ntBASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Gm17047-201ENSMUST00000167709 430 ntBASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Mir378d-201ENSMUST00000184232 110 ntBASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Gm43295-201ENSMUST00000201439 412 ntBASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Gm43946-201ENSMUST00000204058 886 ntBASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Gm18503-201ENSMUST00000220340 728 ntBASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 AC138604.2-201ENSMUST00000226620 921 ntBASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Olfr192-201ENSMUST00000080251 925 ntBASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Gm10540-201ENSMUST00000097581 276 ntBASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Gm10650-202ENSMUST00000196581 1969 ntBASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 AC139758.3-201ENSMUST00000226853 2704 ntBASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Ddx56Q9D0R4 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Ddx56Q9D0R4 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.21
Ddx56Q9D0R4 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Ddx56Q9D0R4 Gm18491-201ENSMUST00000192492 1594 ntBASIC7.46□□□□□ -1.21
Ddx56Q9D0R4 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Ddx56Q9D0R4 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Ddx56Q9D0R4 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.46□□□□□ -1.21
Ddx56Q9D0R4 Gm37420-201ENSMUST00000195332 2912 ntBASIC7.46□□□□□ -1.21
Ddx56Q9D0R4 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Ddx56Q9D0R4 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC7.46□□□□□ -1.21
Ddx56Q9D0R4 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC7.46□□□□□ -1.21
Ddx56Q9D0R4 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm20706-201ENSMUST00000175985 2023 ntBASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm37311-201ENSMUST00000195541 2024 ntBASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC7.46□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms