Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gm10260-201ENSMUST00000074072 561 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Gm21541-201ENSMUST00000098128 870 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 D230017M19Rik-203ENSMUST00000181973 1649 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 AL670757.1-201ENSMUST00000223668 1959 ntBASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Xpnpep2-202ENSMUST00000114998 3017 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Fxr1-208ENSMUST00000200392 3014 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Bcas3-206ENSMUST00000108062 3724 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Gm40841-202ENSMUST00000222823 3989 ntTSL 5 BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Srsf3-202ENSMUST00000130216 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Gm29258-201ENSMUST00000186842 2564 ntBASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Rexo5-203ENSMUST00000106520 2492 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Lepr-202ENSMUST00000102777 3410 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 BB014433-201ENSMUST00000050493 1753 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Arhgap36-201ENSMUST00000042444 2733 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Gm12093-201ENSMUST00000120906 1405 ntBASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Habp2-206ENSMUST00000166049 1650 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Gm43581-201ENSMUST00000196766 2864 ntBASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Olfr1510-202ENSMUST00000215928 1934 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Spin2c-201ENSMUST00000049999 1309 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Pa2g4-201ENSMUST00000026425 2432 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sec61bQ9CQS8 Clmn-202ENSMUST00000109937 3529 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Btbd16-204ENSMUST00000208593 1849 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Dazap2-201ENSMUST00000000356 1826 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Epb41l3-201ENSMUST00000080208 4047 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm43764-201ENSMUST00000202553 3172 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Prss35-201ENSMUST00000036426 3444 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Zfp94-202ENSMUST00000108436 2599 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm1988-201ENSMUST00000188190 2565 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm37483-201ENSMUST00000194382 1484 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Ceacam1-202ENSMUST00000098668 1478 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm12021-201ENSMUST00000121061 1746 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm42515-201ENSMUST00000199936 3583 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Nrf1-205ENSMUST00000115200 2491 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gbp9-202ENSMUST00000100961 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Apex2-204ENSMUST00000112721 1852 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 CT025642.2-201ENSMUST00000225009 1649 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Cyp2d12-201ENSMUST00000068861 1614 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Cldn12-203ENSMUST00000115446 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Pcdhga7-202ENSMUST00000193476 3044 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Aldob-201ENSMUST00000029987 2016 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm23192-201ENSMUST00000102434 96 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm22591-201ENSMUST00000104243 106 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm14410-201ENSMUST00000108964 912 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Apod-202ENSMUST00000115230 1070 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm7803-201ENSMUST00000117176 1015 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm11781-201ENSMUST00000118328 472 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm12206-201ENSMUST00000119795 601 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm7571-201ENSMUST00000120252 927 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm15465-201ENSMUST00000120368 358 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm9159-201ENSMUST00000120661 566 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm13009-201ENSMUST00000121307 267 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Sms-ps-201ENSMUST00000121773 1101 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Fam229b-204ENSMUST00000134279 700 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm12223-201ENSMUST00000135468 528 ntTSL 3 BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Fam229b-207ENSMUST00000137132 663 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm24011-201ENSMUST00000157732 268 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm23032-201ENSMUST00000157995 107 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm25770-201ENSMUST00000158566 115 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm25145-201ENSMUST00000177640 110 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm23379-201ENSMUST00000180026 107 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm26436-201ENSMUST00000180325 132 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm27406-201ENSMUST00000184881 182 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm18700-201ENSMUST00000185791 553 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm29120-201ENSMUST00000186111 696 ntBASIC4.69□□□□□ -1.66
Sec61bQ9CQS8 Gm21840-201ENSMUST00000187212 696 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms