Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Gm43789-201ENSMUST00000199275 2472 ntBASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Gm43029-201ENSMUST00000201829 1535 ntBASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Brf1Q8CFK2 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm44417-201ENSMUST00000203298 3359 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm37274-201ENSMUST00000192167 1682 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm25593-201ENSMUST00000102272 96 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm13877-201ENSMUST00000120614 417 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm12181-201ENSMUST00000121448 531 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm13462-201ENSMUST00000121472 961 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm8577-201ENSMUST00000122420 986 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm20690-201ENSMUST00000177341 315 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm37684-201ENSMUST00000192779 355 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm37526-201ENSMUST00000194640 619 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm36932-201ENSMUST00000195226 929 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm19185-201ENSMUST00000196365 643 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm3549-201ENSMUST00000203873 794 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm44705-201ENSMUST00000206719 339 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 AC153847.1-201ENSMUST00000214524 353 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm17950-201ENSMUST00000214617 646 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm19007-201ENSMUST00000217746 874 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm7252-201ENSMUST00000223284 456 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Mir135a-1-201ENSMUST00000083473 90 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm31049-201ENSMUST00000201516 1302 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Gm15930-201ENSMUST00000156603 2037 ntBASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Brf1Q8CFK2 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Brf1Q8CFK2 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.09
Brf1Q8CFK2 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Brf1Q8CFK2 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Brf1Q8CFK2 AC126549.1-201ENSMUST00000225044 3687 ntBASIC8.21□□□□□ -1.09
Brf1Q8CFK2 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC8.21□□□□□ -1.09
Brf1Q8CFK2 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Brf1Q8CFK2 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Brf1Q8CFK2 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Gm22256-201ENSMUST00000102291 107 ntBASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Gm13739-201ENSMUST00000118020 530 ntBASIC8.21□□□□□ -1.1
Brf1Q8CFK2 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Gm22915-201ENSMUST00000157615 136 ntBASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Gm22730-201ENSMUST00000158085 171 ntBASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Gm9359-201ENSMUST00000163721 1221 ntBASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Gm27507-201ENSMUST00000184199 93 ntBASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Gm35323-201ENSMUST00000191836 499 ntBASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Gm36448-201ENSMUST00000199916 438 ntBASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Gm45122-201ENSMUST00000206376 784 ntBASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Gm4585-201ENSMUST00000207218 452 ntBASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC8.21□□□□□ -1.1
Brf1Q8CFK2 AC151904.5-201ENSMUST00000218975 549 ntBASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Gm31711-201ENSMUST00000220687 196 ntBASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Gm2139-201ENSMUST00000222569 1075 ntBASIC8.21□□□□□ -1.1
Brf1Q8CFK2 AC115735.5-201ENSMUST00000228386 397 ntBASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
Brf1Q8CFK2 n-R5s97-201ENSMUST00000082585 113 ntBASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Gm43557-201ENSMUST00000197100 2370 ntBASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Gm6820-201ENSMUST00000188803 2173 ntBASIC8.21□□□□□ -1.1
Brf1Q8CFK2 Gm15681-201ENSMUST00000137501 2704 ntBASIC8.21□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms