Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Ccdc28aQ8CEI3 Gm20749-201ENSMUST00000186319 3492 ntBASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Gm26416-201ENSMUST00000104280 134 ntBASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Gm14631-201ENSMUST00000119067 594 ntBASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Gm6877-201ENSMUST00000119347 1101 ntBASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Gm26023-201ENSMUST00000122722 313 ntBASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Gm26183-201ENSMUST00000157685 139 ntBASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Gm17047-201ENSMUST00000167709 430 ntBASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Gm8895-201ENSMUST00000172300 1223 ntBASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Mir1231-201ENSMUST00000175639 81 ntBASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Gm21392-201ENSMUST00000182950 972 ntBASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Gm29160-201ENSMUST00000190094 699 ntBASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Gm43013-201ENSMUST00000198216 247 ntBASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Gm30708-201ENSMUST00000202183 312 ntBASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Gm45196-201ENSMUST00000206751 825 ntBASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 AC117769.2-201ENSMUST00000224612 469 ntBASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Gm24451-201ENSMUST00000083353 133 ntBASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 n-R5s89-201ENSMUST00000083532 104 ntBASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Gm23734-201ENSMUST00000083753 109 ntBASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ccdc28aQ8CEI3 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
Ccdc28aQ8CEI3 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm25311-201ENSMUST00000104136 132 ntBASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm14755-201ENSMUST00000118037 384 ntBASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm12331-201ENSMUST00000119927 622 ntBASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm12459-201ENSMUST00000120659 356 ntBASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm12499-201ENSMUST00000121961 546 ntBASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Mir1929-201ENSMUST00000158635 93 ntBASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm43689-201ENSMUST00000195951 427 ntBASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm43595-201ENSMUST00000196464 1071 ntBASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Diaph3-204ENSMUST00000226254 682 ntBASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Ermard-209ENSMUST00000226561 1019 ntBASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 AC156016.2-201ENSMUST00000228200 525 ntBASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 AC107453.3-201ENSMUST00000228205 639 ntBASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 AC132833.4-201ENSMUST00000228313 203 ntBASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC7.02□□□□□ -1.29
Ccdc28aQ8CEI3 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms