Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Ccdc60Q8C4J0 Gm45297-201ENSMUST00000209893 3483 ntBASIC8.59□□□□□ -1.04
Ccdc60Q8C4J0 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Ccdc60Q8C4J0 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 AC139750.1-201ENSMUST00000223962 1300 ntBASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Mir5617-201ENSMUST00000176786 57 ntBASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Gm8609-201ENSMUST00000182967 998 ntBASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Gm19480-201ENSMUST00000185547 667 ntBASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Gm28846-201ENSMUST00000189161 368 ntBASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Gm28665-201ENSMUST00000189269 670 ntBASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Gm44227-201ENSMUST00000203576 241 ntBASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Gm35619-201ENSMUST00000222548 600 ntBASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Gm24621-201ENSMUST00000082679 140 ntBASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Gm37107-201ENSMUST00000195326 2552 ntBASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Gm37310-201ENSMUST00000195237 2968 ntBASIC8.58□□□□□ -1.04
Ccdc60Q8C4J0 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Gm21846-201ENSMUST00000179257 3073 ntBASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Gm34294-201ENSMUST00000191912 4263 ntBASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Gm37518-201ENSMUST00000194930 2603 ntBASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Gm28379-202ENSMUST00000187676 2896 ntBASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Gm5456-201ENSMUST00000170706 844 ntBASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Gm20432-201ENSMUST00000173716 250 ntBASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Gm17045-201ENSMUST00000178600 844 ntBASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Gm37493-201ENSMUST00000193167 433 ntBASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Gm19175-201ENSMUST00000199895 916 ntBASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Gm43203-201ENSMUST00000200130 558 ntBASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Gm19764-201ENSMUST00000203630 649 ntBASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Gm24036-201ENSMUST00000082868 156 ntBASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Ccdc60Q8C4J0 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Gm6987-201ENSMUST00000119319 428 ntBASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Gm22990-201ENSMUST00000175427 89 ntBASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Gm20691-201ENSMUST00000176889 333 ntBASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Gm27152-201ENSMUST00000183828 99 ntBASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Gm27804-201ENSMUST00000185135 119 ntBASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Gm37637-201ENSMUST00000195540 1256 ntBASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Gm43867-201ENSMUST00000203860 525 ntBASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Gm18781-201ENSMUST00000211252 924 ntBASIC8.56□□□□□ -1.04
Ccdc60Q8C4J0 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms