Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Usp40Q8BWR4 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Gm43123-201ENSMUST00000201893 3471 ntBASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Gm5793-201ENSMUST00000119393 630 ntBASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Gm15181-201ENSMUST00000120142 177 ntBASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Gm20615-201ENSMUST00000177503 705 ntBASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Gm8192-201ENSMUST00000182196 958 ntBASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Gm27601-201ENSMUST00000184794 127 ntBASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Gm2229-201ENSMUST00000193328 710 ntBASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Gm44111-201ENSMUST00000204649 399 ntBASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC9.41□□□□□ -0.9
Usp40Q8BWR4 AC153932.1-201ENSMUST00000218558 787 ntBASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 AC168059.2-201ENSMUST00000224473 333 ntBASIC9.41□□□□□ -0.9
Usp40Q8BWR4 AC158388.1-201ENSMUST00000225441 256 ntBASIC9.41□□□□□ -0.9
Usp40Q8BWR4 CT030194.1-201ENSMUST00000225507 532 ntBASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
Usp40Q8BWR4 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Gm31049-201ENSMUST00000201516 1302 ntBASIC9.4□□□□□ -0.9
Usp40Q8BWR4 AC163296.2-201ENSMUST00000220177 1315 ntBASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Gm11893-201ENSMUST00000117829 491 ntBASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Gm8988-201ENSMUST00000155015 1240 ntBASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Gm22428-201ENSMUST00000158554 132 ntBASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 AC165260.4-201ENSMUST00000225924 724 ntBASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Usp40Q8BWR4 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Usp40Q8BWR4 AC122828.2-201ENSMUST00000222511 2880 ntBASIC9.4□□□□□ -0.91
Usp40Q8BWR4 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Usp40Q8BWR4 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC9.4□□□□□ -0.91
Usp40Q8BWR4 Gm36527-201ENSMUST00000195500 3029 ntBASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Gm42866-201ENSMUST00000195919 3304 ntBASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Gm44996-201ENSMUST00000208787 2980 ntBASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Gm44553-201ENSMUST00000206316 2037 ntBASIC9.39□□□□□ -0.91
Usp40Q8BWR4 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Usp40Q8BWR4 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms