Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col16a1Q8BLX7 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col16a1Q8BLX7 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col16a1Q8BLX7 Gm11622-201ENSMUST00000120525 691 ntBASIC8.86□□□□□ -0.99
Col16a1Q8BLX7 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC8.86□□□□□ -0.99
Col16a1Q8BLX7 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC8.86□□□□□ -0.99
Col16a1Q8BLX7 Gm24065-201ENSMUST00000157487 264 ntBASIC8.86□□□□□ -0.99
Col16a1Q8BLX7 Gm22552-201ENSMUST00000157796 337 ntBASIC8.86□□□□□ -0.99
Col16a1Q8BLX7 Gm20778-201ENSMUST00000178524 627 ntBASIC8.86□□□□□ -0.99
Col16a1Q8BLX7 AC154718.1-201ENSMUST00000226676 250 ntBASIC8.86□□□□□ -0.99
Col16a1Q8BLX7 Gm8256-203ENSMUST00000228692 591 ntBASIC8.86□□□□□ -0.99
Col16a1Q8BLX7 Gm23456-201ENSMUST00000083335 137 ntBASIC8.86□□□□□ -0.99
Col16a1Q8BLX7 Gm42930-201ENSMUST00000200872 3260 ntBASIC8.86□□□□□ -0.99
Col16a1Q8BLX7 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col16a1Q8BLX7 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col16a1Q8BLX7 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Gm12919-201ENSMUST00000119855 1594 ntBASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Gm22372-201ENSMUST00000104589 136 ntBASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Gm6181-201ENSMUST00000117187 264 ntBASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Gm5401-201ENSMUST00000122444 365 ntBASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Gm23276-201ENSMUST00000157913 138 ntBASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Gm6918-201ENSMUST00000167622 1222 ntBASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 AC158954.1-201ENSMUST00000228272 1006 ntBASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Gm37310-201ENSMUST00000195237 2968 ntBASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Gm37783-201ENSMUST00000192025 1856 ntBASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col16a1Q8BLX7 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Arhgap19-202ENSMUST00000163265 5058 ntTSL 5 BASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 AC158388.2-201ENSMUST00000223665 1314 ntBASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Gm15332-201ENSMUST00000118386 357 ntBASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Gm14038-201ENSMUST00000121500 807 ntBASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Gm8061-201ENSMUST00000122380 350 ntBASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Mir6361-201ENSMUST00000185079 101 ntBASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Gm37430-201ENSMUST00000193039 196 ntBASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Gm44239-201ENSMUST00000204228 271 ntBASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 AC166358.9-201ENSMUST00000220653 375 ntBASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Hecw2-201ENSMUST00000087659 11171 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 AC158986.1-201ENSMUST00000228391 3455 ntBASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Col16a1Q8BLX7 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -1
Col16a1Q8BLX7 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -1
Col16a1Q8BLX7 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Gm13265-201ENSMUST00000118090 421 ntBASIC8.83□□□□□ -1
Col16a1Q8BLX7 Gm15959-201ENSMUST00000121724 368 ntBASIC8.83□□□□□ -1
Col16a1Q8BLX7 Gm23539-201ENSMUST00000157537 224 ntBASIC8.83□□□□□ -1
Col16a1Q8BLX7 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Mir3097-201ENSMUST00000175356 67 ntBASIC8.83□□□□□ -1
Col16a1Q8BLX7 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Gm29357-201ENSMUST00000186877 698 ntBASIC8.83□□□□□ -1
Col16a1Q8BLX7 Gm17824-201ENSMUST00000197690 805 ntBASIC8.83□□□□□ -1
Col16a1Q8BLX7 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Gm45514-201ENSMUST00000211531 689 ntBASIC8.83□□□□□ -1
Col16a1Q8BLX7 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms