Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Gm37525-201ENSMUST00000193499 2871 ntBASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Ccdc40Q8BI79 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Gm26016-201ENSMUST00000104403 129 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Gm12306-201ENSMUST00000117256 171 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Gm12189-201ENSMUST00000119779 912 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Gm15842-201ENSMUST00000120513 618 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Mir1907-201ENSMUST00000122509 90 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Gm23639-201ENSMUST00000175078 132 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Gm4956-202ENSMUST00000178869 672 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Gm28006-201ENSMUST00000183841 122 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Gm29357-201ENSMUST00000186877 698 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Gm36935-201ENSMUST00000192526 292 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Gm42696-201ENSMUST00000199859 1142 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Gm44590-201ENSMUST00000206161 391 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Gm18860-201ENSMUST00000212029 764 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Gm5119-201ENSMUST00000215858 634 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Gm6667-201ENSMUST00000217169 564 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 AC151901.1-201ENSMUST00000218274 180 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Gm18503-201ENSMUST00000220340 728 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 AC161374.1-201ENSMUST00000224191 794 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 AC187103.4-201ENSMUST00000225399 300 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 AC125405.2-201ENSMUST00000227862 383 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Snora21-201ENSMUST00000082967 137 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Gm33167-201ENSMUST00000201933 2643 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Gm26645-201ENSMUST00000181076 1316 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Gm45838-201ENSMUST00000207355 2447 ntBASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Ccdc40Q8BI79 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Gm16123-201ENSMUST00000118647 1517 ntBASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Mir697-201ENSMUST00000102316 109 ntBASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Gm14893-201ENSMUST00000117904 282 ntBASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Gm14156-201ENSMUST00000121538 483 ntBASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Gm26480-201ENSMUST00000122619 297 ntBASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Gm20549-201ENSMUST00000174804 429 ntBASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Mir7084-201ENSMUST00000183876 70 ntBASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Gm29369-201ENSMUST00000190674 615 ntBASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Gm3511-201ENSMUST00000199823 204 ntBASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 AC154904.1-201ENSMUST00000219510 312 ntBASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Gm35638-201ENSMUST00000220724 652 ntBASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 AC139941.1-201ENSMUST00000221517 478 ntBASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 AC161877.2-201ENSMUST00000226248 545 ntBASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 AC122024.1-201ENSMUST00000219276 4850 ntBASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Gm37653-201ENSMUST00000195401 3578 ntBASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Ccdc40Q8BI79 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Ccdc40Q8BI79 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Ccdc40Q8BI79 Gm19801-201ENSMUST00000218231 1882 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms