Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm8177-201ENSMUST00000181591 1336 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm43581-201ENSMUST00000196766 2864 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm16073-201ENSMUST00000116032 517 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm5601-201ENSMUST00000118909 972 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm15750-201ENSMUST00000120970 616 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm17895-201ENSMUST00000194028 874 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm7019-201ENSMUST00000194122 369 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm19088-201ENSMUST00000198800 566 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm43243-201ENSMUST00000199964 278 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm44911-201ENSMUST00000208436 1062 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 AC122305.2-201ENSMUST00000215148 834 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm6575-201ENSMUST00000222946 697 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 AC124489.3-201ENSMUST00000224037 278 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 n-R5s95-201ENSMUST00000082684 118 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Mir196a-1-201ENSMUST00000083612 102 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm21781-201ENSMUST00000178920 4838 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm44194-201ENSMUST00000204222 3229 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm45112-201ENSMUST00000208576 5125 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 AC138284.1-201ENSMUST00000214258 3236 ntBASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm15789-201ENSMUST00000118992 1359 ntBASIC8.1□□□□□ -1.11
Vps54Q5SPW0 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 AC105407.2-205ENSMUST00000224680 2733 ntBASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 n-R5s172-201ENSMUST00000104508 114 ntBASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm12135-201ENSMUST00000119170 466 ntBASIC8.1□□□□□ -1.11
Vps54Q5SPW0 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC8.1□□□□□ -1.11
Vps54Q5SPW0 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 CT009527.2-201ENSMUST00000225386 606 ntBASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm43421-201ENSMUST00000200044 2905 ntBASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm15930-201ENSMUST00000156603 2037 ntBASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC8.1□□□□□ -1.11
Vps54Q5SPW0 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Vps54Q5SPW0 Gm9226-201ENSMUST00000188352 3489 ntBASIC8.09□□□□□ -1.11
Vps54Q5SPW0 Gm43335-201ENSMUST00000198299 3276 ntBASIC8.09□□□□□ -1.11
Vps54Q5SPW0 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC8.09□□□□□ -1.11
Vps54Q5SPW0 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Vps54Q5SPW0 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Vps54Q5SPW0 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Vps54Q5SPW0 Gm9575-201ENSMUST00000122140 1339 ntBASIC8.09□□□□□ -1.11
Vps54Q5SPW0 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
Vps54Q5SPW0 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Vps54Q5SPW0 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Vps54Q5SPW0 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Vps54Q5SPW0 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Vps54Q5SPW0 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Vps54Q5SPW0 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Vps54Q5SPW0 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 103.3 ms