Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC4.49□□□□□ -1.69
PrkdcP97313 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Gm29670-201ENSMUST00000190228 2491 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC4.49□□□□□ -1.69
PrkdcP97313 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
PrkdcP97313 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PrkdcP97313 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Gm36401-201ENSMUST00000194255 2028 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Gm44553-201ENSMUST00000206316 2037 ntBASIC4.49□□□□□ -1.69
PrkdcP97313 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PrkdcP97313 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC4.49□□□□□ -1.69
PrkdcP97313 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PrkdcP97313 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PrkdcP97313 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
PrkdcP97313 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PrkdcP97313 Gm22820-201ENSMUST00000157205 329 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Gm25722-201ENSMUST00000157498 279 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC4.48□□□□□ -1.69
PrkdcP97313 Gm29159-201ENSMUST00000187969 379 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Gm7463-201ENSMUST00000201541 547 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC4.48□□□□□ -1.69
PrkdcP97313 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC4.48□□□□□ -1.69
PrkdcP97313 AC152394.1-201ENSMUST00000227360 1086 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
PrkdcP97313 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC4.48□□□□□ -1.69
PrkdcP97313 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Gm37906-201ENSMUST00000192050 3035 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PrkdcP97313 AC122291.1-201ENSMUST00000228937 5748 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Gm44661-201ENSMUST00000208830 3503 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Gm15229-201ENSMUST00000146636 1398 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Gm43637-201ENSMUST00000202206 2926 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PrkdcP97313 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PrkdcP97313 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Gm6744-201ENSMUST00000119303 543 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 n-R5s19-201ENSMUST00000122793 120 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Ear-ps5-201ENSMUST00000164700 463 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
PrkdcP97313 Igkv4-75-201ENSMUST00000197204 359 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Gm43946-201ENSMUST00000204058 886 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC4.48□□□□□ -1.69
PrkdcP97313 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Slc9b2-201ENSMUST00000051849 4818 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PrkdcP97313 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PrkdcP97313 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PrkdcP97313 Prkrip1-204ENSMUST00000151786 3893 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PrkdcP97313 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PrkdcP97313 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
PrkdcP97313 Gm13811-201ENSMUST00000117800 256 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC4.48□□□□□ -1.69
PrkdcP97313 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.48□□□□□ -1.69
PrkdcP97313 Mir196a-1-201ENSMUST00000083612 102 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PrkdcP97313 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC4.48□□□□□ -1.69
PrkdcP97313 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
PrkdcP97313 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
PrkdcP97313 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PrkdcP97313 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC4.48□□□□□ -1.69
PrkdcP97313 Gm18313-201ENSMUST00000221036 1784 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC4.48□□□□□ -1.69
PrkdcP97313 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC4.48□□□□□ -1.69
PrkdcP97313 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Gm27875-201ENSMUST00000184425 123 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Gm5554-201ENSMUST00000199726 1206 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC4.48□□□□□ -1.69
PrkdcP97313 Gm45724-201ENSMUST00000213031 420 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC4.48□□□□□ -1.69
PrkdcP97313 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Gm24041-201ENSMUST00000083115 156 ntBASIC4.48□□□□□ -1.69
PrkdcP97313 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PrkdcP97313 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC4.48□□□□□ -1.69
PrkdcP97313 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PrkdcP97313 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms