Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb1P63158 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb1P63158 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb1P63158 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm42492-201ENSMUST00000195780 2915 ntBASIC7.95□□□□□ -1.14
Hmgb1P63158 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm5133-201ENSMUST00000118940 1255 ntBASIC7.95□□□□□ -1.14
Hmgb1P63158 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm22600-201ENSMUST00000157598 269 ntBASIC7.95□□□□□ -1.14
Hmgb1P63158 Mir199b-201ENSMUST00000175066 110 ntBASIC7.95□□□□□ -1.14
Hmgb1P63158 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb1P63158 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm27972-201ENSMUST00000184720 137 ntBASIC7.95□□□□□ -1.14
Hmgb1P63158 Mir6922-201ENSMUST00000185099 66 ntBASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm18348-201ENSMUST00000191227 820 ntBASIC7.95□□□□□ -1.14
Hmgb1P63158 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm37463-201ENSMUST00000193819 796 ntBASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm26413-202ENSMUST00000198972 127 ntBASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm44221-201ENSMUST00000203552 388 ntBASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm44604-201ENSMUST00000205475 496 ntBASIC7.95□□□□□ -1.14
Hmgb1P63158 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm29977-201ENSMUST00000206804 724 ntBASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm45478-201ENSMUST00000209472 211 ntBASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm21112-201ENSMUST00000212224 578 ntBASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm7760-201ENSMUST00000212265 578 ntBASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm7807-201ENSMUST00000212475 578 ntBASIC7.95□□□□□ -1.14
Hmgb1P63158 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC7.95□□□□□ -1.14
Hmgb1P63158 AC120002.1-201ENSMUST00000218456 331 ntBASIC7.95□□□□□ -1.14
Hmgb1P63158 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb1P63158 AC166822.1-201ENSMUST00000227667 636 ntBASIC7.95□□□□□ -1.14
Hmgb1P63158 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm6807-201ENSMUST00000077435 888 ntBASIC7.95□□□□□ -1.14
Hmgb1P63158 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb1P63158 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb1P63158 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb1P63158 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb1P63158 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Hmgb1P63158 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb1P63158 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb1P63158 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb1P63158 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm44416-201ENSMUST00000204055 2066 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC7.94□□□□□ -1.14
Hmgb1P63158 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC7.94□□□□□ -1.14
Hmgb1P63158 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Malat1-201ENSMUST00000172812 6983 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm37420-201ENSMUST00000195332 2912 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC7.94□□□□□ -1.14
Hmgb1P63158 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm6491-201ENSMUST00000118273 990 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm11558-201ENSMUST00000118454 459 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm13006-201ENSMUST00000118683 214 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm14787-201ENSMUST00000121236 388 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC7.94□□□□□ -1.14
Hmgb1P63158 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm25082-201ENSMUST00000177296 255 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Mir6239-201ENSMUST00000183564 105 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm28416-201ENSMUST00000188334 292 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm37614-201ENSMUST00000195645 210 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm18747-201ENSMUST00000198129 648 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm43725-201ENSMUST00000200122 369 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC7.94□□□□□ -1.14
Hmgb1P63158 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC7.94□□□□□ -1.14
Hmgb1P63158 AC166323.1-201ENSMUST00000217756 367 ntBASIC7.94□□□□□ -1.14
Hmgb1P63158 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC7.94□□□□□ -1.14
Hmgb1P63158 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 170.6 ms