Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC3.79□□□□□ -1.8
Rps28P62858 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 Gm26134-201ENSMUST00000178484 110 ntBASIC3.79□□□□□ -1.8
Rps28P62858 Gm8257-203ENSMUST00000179215 489 ntTSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC3.79□□□□□ -1.8
Rps28P62858 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Rps28P62858 Gm11239-202ENSMUST00000179977 1080 ntTSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 Mir6356-201ENSMUST00000183541 102 ntBASIC3.79□□□□□ -1.8
Rps28P62858 Gm27833-201ENSMUST00000184285 124 ntBASIC3.79□□□□□ -1.8
Rps28P62858 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 Gm27731-201ENSMUST00000185192 107 ntBASIC3.79□□□□□ -1.8
Rps28P62858 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 Gm2324-201ENSMUST00000187464 662 ntBASIC3.79□□□□□ -1.8
Rps28P62858 Gm29188-201ENSMUST00000191173 767 ntTSL 3 BASIC3.79□□□□□ -1.8
Rps28P62858 Gm37070-201ENSMUST00000193272 460 ntBASIC3.79□□□□□ -1.8
Rps28P62858 Gm37614-201ENSMUST00000195645 210 ntBASIC3.79□□□□□ -1.8
Rps28P62858 Gm31274-201ENSMUST00000197356 229 ntBASIC3.79□□□□□ -1.8
Rps28P62858 Gm43656-201ENSMUST00000197882 434 ntBASIC3.79□□□□□ -1.8
Rps28P62858 Gm43743-201ENSMUST00000197898 697 ntBASIC3.79□□□□□ -1.8
Rps28P62858 4930573I07Rik-202ENSMUST00000199120 413 ntTSL 3 BASIC3.79□□□□□ -1.8
Rps28P62858 Gm7879-202ENSMUST00000200338 635 ntTSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Rps28P62858 Gm30781-201ENSMUST00000204743 216 ntTSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Rps28P62858 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 AC164087.2-201ENSMUST00000216206 1072 ntBASIC3.79□□□□□ -1.8
Rps28P62858 Gm4510-201ENSMUST00000218265 427 ntBASIC3.79□□□□□ -1.8
Rps28P62858 AL713985.1-201ENSMUST00000219030 420 ntBASIC3.79□□□□□ -1.8
Rps28P62858 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC3.79□□□□□ -1.8
Rps28P62858 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 Gm18510-201ENSMUST00000219335 1096 ntBASIC3.79□□□□□ -1.8
Rps28P62858 AC158802.1-201ENSMUST00000219693 361 ntBASIC3.79□□□□□ -1.8
Rps28P62858 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC3.79□□□□□ -1.8
Rps28P62858 AC154849.4-201ENSMUST00000224868 365 ntBASIC3.79□□□□□ -1.8
Rps28P62858 AC130673.1-201ENSMUST00000227992 435 ntBASIC3.79□□□□□ -1.8
Rps28P62858 AC154528.1-201ENSMUST00000228584 527 ntBASIC3.79□□□□□ -1.8
Rps28P62858 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Rps28P62858 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 Tex29-201ENSMUST00000033909 822 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Rps28P62858 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Rps28P62858 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Rps28P62858 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC3.79□□□□□ -1.8
Rps28P62858 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Rps28P62858 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Rps28P62858 Gm45378-201ENSMUST00000211063 2711 ntBASIC3.79□□□□□ -1.8
Rps28P62858 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Rps28P62858 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 Gm1966-201ENSMUST00000184540 7293 ntBASIC3.79□□□□□ -1.8
Rps28P62858 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Rps28P62858 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Rps28P62858 AC122357.3-201ENSMUST00000221260 2293 ntBASIC3.79□□□□□ -1.8
Rps28P62858 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Rps28P62858 Gm42548-201ENSMUST00000202669 3933 ntBASIC3.79□□□□□ -1.8
Rps28P62858 Fam227b-201ENSMUST00000110446 1858 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Rps28P62858 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 Gm5454-201ENSMUST00000052030 1453 ntBASIC3.79□□□□□ -1.8
Rps28P62858 Gm37738-201ENSMUST00000192396 4716 ntBASIC3.79□□□□□ -1.8
Rps28P62858 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC3.79□□□□□ -1.8
Rps28P62858 Gm44242-201ENSMUST00000204212 2721 ntBASIC3.79□□□□□ -1.8
Rps28P62858 Gm2099-202ENSMUST00000223310 3341 ntBASIC3.78□□□□□ -1.8
Rps28P62858 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Rps28P62858 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Rps28P62858 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Rps28P62858 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Rps28P62858 Gm19125-201ENSMUST00000188408 1383 ntBASIC3.78□□□□□ -1.8
Rps28P62858 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Rps28P62858 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Rps28P62858 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Rps28P62858 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Rps28P62858 CT025604.1-201ENSMUST00000221111 3436 ntBASIC3.78□□□□□ -1.8
Rps28P62858 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Rps28P62858 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Rps28P62858 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Rps28P62858 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
Rps28P62858 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Rps28P62858 Gm23935-201ENSMUST00000102303 57 ntBASIC3.78□□□□□ -1.8
Rps28P62858 Gm24270-201ENSMUST00000102326 57 ntBASIC3.78□□□□□ -1.8
Rps28P62858 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Rps28P62858 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Rps28P62858 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Rps28P62858 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Rps28P62858 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Rps28P62858 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Rps28P62858 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Rps28P62858 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Rps28P62858 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Rps28P62858 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC3.78□□□□□ -1.8
Rps28P62858 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Rps28P62858 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Rps28P62858 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Rps28P62858 Gm7821-201ENSMUST00000117111 788 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms