Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Lmo4P61969 Gm43970-201ENSMUST00000204346 3605 ntBASIC5.54□□□□□ -1.52
Lmo4P61969 CT025642.2-201ENSMUST00000225009 1649 ntBASIC5.54□□□□□ -1.52
Lmo4P61969 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lmo4P61969 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Lmo4P61969 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Lmo4P61969 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lmo4P61969 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Lmo4P61969 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Lmo4P61969 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lmo4P61969 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lmo4P61969 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Lmo4P61969 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lmo4P61969 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lmo4P61969 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC5.54□□□□□ -1.52
Lmo4P61969 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC5.54□□□□□ -1.52
Lmo4P61969 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lmo4P61969 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Lmo4P61969 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lmo4P61969 Gm37783-201ENSMUST00000192025 1856 ntBASIC5.54□□□□□ -1.52
Lmo4P61969 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC5.53□□□□□ -1.52
Lmo4P61969 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Lmo4P61969 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC5.53□□□□□ -1.52
Lmo4P61969 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Lmo4P61969 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC5.53□□□□□ -1.52
Lmo4P61969 Gm45073-201ENSMUST00000207688 4247 ntBASIC5.53□□□□□ -1.52
Lmo4P61969 CT025535.2-201ENSMUST00000228572 7441 ntBASIC5.53□□□□□ -1.52
Lmo4P61969 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Lmo4P61969 Gm15000-201ENSMUST00000118275 1243 ntBASIC5.53□□□□□ -1.52
Lmo4P61969 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC5.53□□□□□ -1.52
Lmo4P61969 Gm5793-201ENSMUST00000119393 630 ntBASIC5.53□□□□□ -1.52
Lmo4P61969 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC5.53□□□□□ -1.52
Lmo4P61969 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC5.53□□□□□ -1.52
Lmo4P61969 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.53□□□□□ -1.52
Lmo4P61969 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 Gm22885-201ENSMUST00000157410 107 ntBASIC5.53□□□□□ -1.52
Lmo4P61969 Gm3140-201ENSMUST00000163523 481 ntBASIC5.53□□□□□ -1.52
Lmo4P61969 Gm4152-201ENSMUST00000172675 259 ntBASIC5.53□□□□□ -1.52
Lmo4P61969 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC5.53□□□□□ -1.52
Lmo4P61969 Gm27507-201ENSMUST00000184199 93 ntBASIC5.53□□□□□ -1.52
Lmo4P61969 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 Gm36935-201ENSMUST00000192526 292 ntBASIC5.53□□□□□ -1.52
Lmo4P61969 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC5.53□□□□□ -1.52
Lmo4P61969 Gm43235-201ENSMUST00000200121 297 ntBASIC5.53□□□□□ -1.52
Lmo4P61969 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC5.53□□□□□ -1.52
Lmo4P61969 Gm45122-201ENSMUST00000206376 784 ntBASIC5.53□□□□□ -1.52
Lmo4P61969 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC5.53□□□□□ -1.52
Lmo4P61969 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC5.53□□□□□ -1.52
Lmo4P61969 Gm4556-201ENSMUST00000217808 355 ntBASIC5.53□□□□□ -1.52
Lmo4P61969 AC131795.1-201ENSMUST00000219632 426 ntBASIC5.53□□□□□ -1.52
Lmo4P61969 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC5.53□□□□□ -1.52
Lmo4P61969 AC156016.2-201ENSMUST00000228200 525 ntBASIC5.53□□□□□ -1.52
Lmo4P61969 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
Lmo4P61969 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 Gm9839-201ENSMUST00000195252 1437 ntBASIC5.53□□□□□ -1.52
Lmo4P61969 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Lmo4P61969 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC5.53□□□□□ -1.52
Lmo4P61969 Gm43335-201ENSMUST00000198299 3276 ntBASIC5.53□□□□□ -1.52
Lmo4P61969 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Lmo4P61969 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Lmo4P61969 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
Lmo4P61969 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lmo4P61969 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Lmo4P61969 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lmo4P61969 Gm43113-201ENSMUST00000199713 1754 ntBASIC5.52□□□□□ -1.53
Lmo4P61969 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lmo4P61969 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lmo4P61969 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lmo4P61969 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Lmo4P61969 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Lmo4P61969 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Lmo4P61969 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Lmo4P61969 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC5.52□□□□□ -1.53
Lmo4P61969 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC5.52□□□□□ -1.53
Lmo4P61969 Gm7961-201ENSMUST00000201338 1436 ntBASIC5.52□□□□□ -1.53
Lmo4P61969 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lmo4P61969 Gm45112-201ENSMUST00000208576 5125 ntBASIC5.52□□□□□ -1.53
Lmo4P61969 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC5.52□□□□□ -1.53
Lmo4P61969 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Lmo4P61969 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Lmo4P61969 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Lmo4P61969 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms