Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm19709-201ENSMUST00000215403 482 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm18292-201ENSMUST00000216673 919 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 AC166323.1-201ENSMUST00000217756 367 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm9249-201ENSMUST00000221420 578 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC6.73□□□□□ -1.33
Sf3b6P59708 AC153153.2-201ENSMUST00000223572 411 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 AC131745.3-201ENSMUST00000223582 554 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 AC137117.3-201ENSMUST00000226265 485 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 AC137902.2-201ENSMUST00000227989 576 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Mir486-201ENSMUST00000093576 128 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Olfr654-201ENSMUST00000098173 1155 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC6.73□□□□□ -1.33
Sf3b6P59708 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Entpd3-201ENSMUST00000047687 3453 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm43181-201ENSMUST00000197001 2072 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 AC140280.1-201ENSMUST00000227826 1847 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Sf3b6P59708 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.73□□□□□ -1.33
Sf3b6P59708 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 CT025566.1-202ENSMUST00000224800 2511 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3b6P59708 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3b6P59708 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3b6P59708 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3b6P59708 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Zranb1-201ENSMUST00000033265 2210 ntAPPRIS P2 TSL 2 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm43528-201ENSMUST00000199492 1674 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm25761-201ENSMUST00000103983 128 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm23946-201ENSMUST00000104423 197 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm11212-201ENSMUST00000118337 618 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm15233-201ENSMUST00000118747 400 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm11220-201ENSMUST00000118844 475 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm13680-201ENSMUST00000119790 793 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm14712-201ENSMUST00000120195 772 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm13828-201ENSMUST00000122278 363 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm24198-201ENSMUST00000157812 108 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm23663-201ENSMUST00000158045 80 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm19840-201ENSMUST00000169624 882 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm4252-201ENSMUST00000174823 313 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC6.72□□□□□ -1.33
Sf3b6P59708 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm28648-201ENSMUST00000190092 343 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm28639-201ENSMUST00000191519 481 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Pisrt1-201ENSMUST00000195532 515 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm43247-201ENSMUST00000198638 481 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm18469-201ENSMUST00000208850 439 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm45458-201ENSMUST00000209900 522 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.72□□□□□ -1.33
Sf3b6P59708 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC6.72□□□□□ -1.33
Sf3b6P59708 CT030124.1-201ENSMUST00000217130 235 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC6.72□□□□□ -1.33
Sf3b6P59708 AC163667.2-201ENSMUST00000223769 791 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 AC130219.2-201ENSMUST00000228765 807 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Olfr1255-201ENSMUST00000057369 933 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3b6P59708 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm9761-201ENSMUST00000075650 492 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm26132-201ENSMUST00000083166 148 ntBASIC6.72□□□□□ -1.33
Sf3b6P59708 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3b6P59708 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3b6P59708 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sf3b6P59708 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 113.9 ms