Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC7.38□□□□□ -1.23
NcanP55066 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
NcanP55066 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC7.38□□□□□ -1.23
NcanP55066 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
NcanP55066 AC129208.1-201ENSMUST00000227474 2906 ntBASIC7.38□□□□□ -1.23
NcanP55066 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC7.38□□□□□ -1.23
NcanP55066 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
NcanP55066 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC7.37□□□□□ -1.23
NcanP55066 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NcanP55066 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
NcanP55066 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC7.37□□□□□ -1.23
NcanP55066 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
NcanP55066 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NcanP55066 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NcanP55066 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
NcanP55066 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
NcanP55066 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NcanP55066 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
NcanP55066 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NcanP55066 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
NcanP55066 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
NcanP55066 Gm3810-201ENSMUST00000122413 476 ntBASIC7.37□□□□□ -1.23
NcanP55066 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NcanP55066 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
NcanP55066 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
NcanP55066 Mir6361-201ENSMUST00000185079 101 ntBASIC7.37□□□□□ -1.23
NcanP55066 Gm29519-201ENSMUST00000186994 398 ntBASIC7.37□□□□□ -1.23
NcanP55066 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC7.37□□□□□ -1.23
NcanP55066 Gm37463-201ENSMUST00000193819 796 ntBASIC7.37□□□□□ -1.23
NcanP55066 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC7.37□□□□□ -1.23
NcanP55066 Gm5990-201ENSMUST00000203126 746 ntBASIC7.37□□□□□ -1.23
NcanP55066 Gm18943-201ENSMUST00000207357 1216 ntBASIC7.37□□□□□ -1.23
NcanP55066 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
NcanP55066 Gm45448-201ENSMUST00000211739 209 ntBASIC7.37□□□□□ -1.23
NcanP55066 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.37□□□□□ -1.23
NcanP55066 AC151904.3-201ENSMUST00000219266 895 ntBASIC7.37□□□□□ -1.23
NcanP55066 AC119894.1-201ENSMUST00000220399 350 ntBASIC7.37□□□□□ -1.23
NcanP55066 Gm33312-201ENSMUST00000222443 332 ntBASIC7.37□□□□□ -1.23
NcanP55066 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
NcanP55066 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
NcanP55066 Mir337-201ENSMUST00000083592 97 ntBASIC7.37□□□□□ -1.23
NcanP55066 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC7.37□□□□□ -1.23
NcanP55066 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
NcanP55066 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NcanP55066 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC7.37□□□□□ -1.23
NcanP55066 Gm44007-201ENSMUST00000203845 2189 ntBASIC7.37□□□□□ -1.23
NcanP55066 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
NcanP55066 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
NcanP55066 Gm43421-201ENSMUST00000200044 2905 ntBASIC7.37□□□□□ -1.23
NcanP55066 Gm44104-201ENSMUST00000204736 3777 ntBASIC7.37□□□□□ -1.23
NcanP55066 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
NcanP55066 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
NcanP55066 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
NcanP55066 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC7.36□□□□□ -1.23
NcanP55066 Gm37520-201ENSMUST00000194883 2672 ntBASIC7.36□□□□□ -1.23
NcanP55066 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
NcanP55066 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
NcanP55066 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NcanP55066 Gm11853-201ENSMUST00000119687 1384 ntBASIC7.36□□□□□ -1.23
NcanP55066 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
NcanP55066 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC7.36□□□□□ -1.23
NcanP55066 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NcanP55066 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC7.36□□□□□ -1.23
NcanP55066 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
NcanP55066 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NcanP55066 Gm15502-201ENSMUST00000121449 208 ntBASIC7.36□□□□□ -1.23
NcanP55066 Gm11581-201ENSMUST00000122024 763 ntBASIC7.36□□□□□ -1.23
NcanP55066 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC7.36□□□□□ -1.23
NcanP55066 Gm23674-201ENSMUST00000157473 131 ntBASIC7.36□□□□□ -1.23
NcanP55066 Mir1960-201ENSMUST00000157488 78 ntBASIC7.36□□□□□ -1.23
NcanP55066 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC7.36□□□□□ -1.23
NcanP55066 Gm25244-201ENSMUST00000178089 132 ntBASIC7.36□□□□□ -1.23
NcanP55066 Gm42443-201ENSMUST00000198084 1155 ntBASIC7.36□□□□□ -1.23
NcanP55066 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC7.36□□□□□ -1.23
NcanP55066 Gm45899-201ENSMUST00000212196 1276 ntBASIC7.36□□□□□ -1.23
NcanP55066 Gm18996-201ENSMUST00000214851 755 ntBASIC7.36□□□□□ -1.23
NcanP55066 Gm3266-201ENSMUST00000217832 591 ntBASIC7.36□□□□□ -1.23
NcanP55066 Gm19116-201ENSMUST00000218592 642 ntBASIC7.36□□□□□ -1.23
NcanP55066 AC154583.1-201ENSMUST00000224788 655 ntBASIC7.36□□□□□ -1.23
NcanP55066 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NcanP55066 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
NcanP55066 Rybp-ps-201ENSMUST00000069489 681 ntBASIC7.36□□□□□ -1.23
NcanP55066 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC7.36□□□□□ -1.23
NcanP55066 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
NcanP55066 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
NcanP55066 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
NcanP55066 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
NcanP55066 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
NcanP55066 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
NcanP55066 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NcanP55066 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NcanP55066 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NcanP55066 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NcanP55066 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NcanP55066 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
NcanP55066 Gm44165-201ENSMUST00000203093 1469 ntBASIC7.36□□□□□ -1.23
NcanP55066 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
NcanP55066 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms